Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   QNK02_RS19130 Genome accession   NZ_CP126083
Coordinates   3712973..3713092 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain C1_9     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3707973..3718092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK02_RS19110 (QNK02_19110) albG 3708137..3708838 (+) 702 WP_041850410.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  QNK02_RS19115 (QNK02_19115) ywhL 3708844..3710220 (-) 1377 WP_041850409.1 YncE family protein -
  QNK02_RS19120 (QNK02_19120) ywhK 3710259..3711614 (-) 1356 WP_041850408.1 YncE family protein -
  QNK02_RS21080 - 3711611..3711841 (-) 231 Protein_3705 hypothetical protein -
  QNK02_RS19125 (QNK02_19125) rapF 3711844..3712989 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  QNK02_RS19130 (QNK02_19130) phrF 3712973..3713092 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  QNK02_RS19135 (QNK02_19135) ywhH 3713190..3713663 (+) 474 Protein_3708 YbaK/EbsC family protein -
  QNK02_RS19140 (QNK02_19140) speB 3713694..3714566 (-) 873 WP_003227545.1 agmatinase -
  QNK02_RS19145 (QNK02_19145) speE 3714627..3715457 (-) 831 WP_003227543.1 spermidine synthase -
  QNK02_RS19150 (QNK02_19150) pbpG 3715659..3717734 (+) 2076 WP_041850407.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=834946 QNK02_RS19130 WP_009968329.1 3712973..3713092(+) (phrF) [Bacillus subtilis strain C1_9]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=834946 QNK02_RS19130 WP_009968329.1 3712973..3713092(+) (phrF) [Bacillus subtilis strain C1_9]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487