Detailed information NTG0834811

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: QNH30_RS06065
• Genome accession: NZ_CP126082
• Coordinates: 1174762..1175715 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain C1_13
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1169762..1180715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH30_RS06040 (QNH30_06040)	argF	1171593..1172552 (+)	960	WP_041850983.1	ornithine carbamoyltransferase	-
QNH30_RS06045 (QNH30_06045)	yjzC	1172638..1172817 (+)	180	WP_003245356.1	YjzC family protein	-
QNH30_RS06050 (QNH30_06050)	yjzD	1172863..1173048 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
QNH30_RS06055 (QNH30_06055)	-	1173298..1174032 (+)	735	WP_041850982.1	hypothetical protein	-
QNH30_RS06060 (QNH30_06060)	-	1174114..1174671 (+)	558	WP_014476424.1	hypothetical protein	-
QNH30_RS06065 (QNH30_06065)	med	1174762..1175715 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
QNH30_RS06070 (QNH30_06070)	comZ	1175730..1175921 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
QNH30_RS06075 (QNH30_06075)	yjzB	1175951..1176190 (-)	240	WP_003232972.1	spore coat protein YjzB	-
QNH30_RS06080 (QNH30_06080)	fabH	1176355..1177293 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
QNH30_RS06085 (QNH30_06085)	fabF	1177316..1178557 (+)	1242	WP_041850981.1	beta-ketoacyl-ACP synthase II	-
QNH30_RS06090 (QNH30_06090)	yjaZ	1178633..1179418 (+)	786	WP_032721346.1	DUF2268 domain-containing protein	-
QNH30_RS06095 (QNH30_06095)	appD	1179610..1180596 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=834811 QNH30_RS06065 WP_014476425.1 1174762..1175715(+) (med) [Bacillus subtilis strain C1_13]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=834811 QNH30_RS06065 WP_014476425.1 1174762..1175715(+) (med) [Bacillus subtilis strain C1_13]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGTCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997