Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH30_RS06070 Genome accession   NZ_CP126082
Coordinates   1175730..1175921 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain C1_13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1170730..1180921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH30_RS06040 (QNH30_06040) argF 1171593..1172552 (+) 960 WP_041850983.1 ornithine carbamoyltransferase -
  QNH30_RS06045 (QNH30_06045) yjzC 1172638..1172817 (+) 180 WP_003245356.1 YjzC family protein -
  QNH30_RS06050 (QNH30_06050) yjzD 1172863..1173048 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  QNH30_RS06055 (QNH30_06055) - 1173298..1174032 (+) 735 WP_041850982.1 hypothetical protein -
  QNH30_RS06060 (QNH30_06060) - 1174114..1174671 (+) 558 WP_014476424.1 hypothetical protein -
  QNH30_RS06065 (QNH30_06065) med 1174762..1175715 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  QNH30_RS06070 (QNH30_06070) comZ 1175730..1175921 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QNH30_RS06075 (QNH30_06075) yjzB 1175951..1176190 (-) 240 WP_003232972.1 spore coat protein YjzB -
  QNH30_RS06080 (QNH30_06080) fabH 1176355..1177293 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  QNH30_RS06085 (QNH30_06085) fabF 1177316..1178557 (+) 1242 WP_041850981.1 beta-ketoacyl-ACP synthase II -
  QNH30_RS06090 (QNH30_06090) yjaZ 1178633..1179418 (+) 786 WP_032721346.1 DUF2268 domain-containing protein -
  QNH30_RS06095 (QNH30_06095) appD 1179610..1180596 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=834812 QNH30_RS06070 WP_003224559.1 1175730..1175921(+) (comZ) [Bacillus subtilis strain C1_13]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=834812 QNH30_RS06070 WP_003224559.1 1175730..1175921(+) (comZ) [Bacillus subtilis strain C1_13]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1