Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   QNH36_RS17630 Genome accession   NZ_CP126080
Coordinates   3479179..3479931 (-) Length   250 a.a.
NCBI ID   WP_283905433.1    Uniprot ID   A0AA95HXZ4
Organism   Mesobacillus sp. AQ2     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3474179..3484931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH36_RS17605 (QNH36_17605) - 3474708..3475280 (-) 573 WP_283903887.1 Maf family protein -
  QNH36_RS17610 (QNH36_17610) - 3475472..3476593 (-) 1122 WP_186326769.1 SPOR domain-containing protein -
  QNH36_RS17615 (QNH36_17615) - 3476711..3477532 (-) 822 WP_283903888.1 hypothetical protein -
  QNH36_RS17620 (QNH36_17620) - 3477529..3478170 (-) 642 WP_283903889.1 hypothetical protein -
  QNH36_RS17625 (QNH36_17625) pilM 3478167..3479162 (-) 996 WP_283903890.1 pilus assembly protein PilM -
  QNH36_RS17630 (QNH36_17630) comC 3479179..3479931 (-) 753 WP_283905433.1 A24 family peptidase Machinery gene
  QNH36_RS17635 (QNH36_17635) - 3479936..3480400 (-) 465 WP_144477703.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  QNH36_RS17640 (QNH36_17640) - 3480527..3481732 (-) 1206 WP_144477701.1 type II secretion system F family protein -
  QNH36_RS17645 (QNH36_17645) pilT 3481735..3482775 (-) 1041 WP_283903891.1 type IV pilus twitching motility protein PilT Machinery gene
  QNH36_RS17650 (QNH36_17650) - 3482789..3484450 (-) 1662 WP_283903892.1 ATPase, T2SS/T4P/T4SS family -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27596.42 Da        Isoelectric Point: 9.6677

>NTDB_id=834712 QNH36_RS17630 WP_283905433.1 3479179..3479931(-) (comC) [Mesobacillus sp. AQ2]
MYIFLFSYGLLLGSFYNVVGLRVPEGKSIVAPRSSCPKCGHQLMALELIPVLSYLFQRGKCRQCKVGISPVYPFFELLTG
LLFAGAFLLKGWNYELLIALTLISLFIIITVSDLAYMIIPDRVLLVFAGIFALERINQPLMPWWASLIGAAAGFILLLLI
AFASKGGMGGGDIKLFALIGFAVGFKSMLLSFFFSTFFGAFFGIIGLLFGLVKKKQPIPFGPFIGIGTLTAYFFGEKIID
WYLNLLLTVF

Nucleotide


Download         Length: 753 bp        

>NTDB_id=834712 QNH36_RS17630 WP_283905433.1 3479179..3479931(-) (comC) [Mesobacillus sp. AQ2]
ATGTATATTTTCTTATTTAGTTACGGCCTCCTTCTAGGCTCCTTCTACAACGTTGTAGGACTGCGAGTGCCGGAAGGCAA
ATCCATCGTAGCACCGCGCTCTTCCTGTCCGAAATGCGGGCACCAGTTGATGGCACTTGAGTTAATTCCTGTTCTATCAT
ATCTATTCCAAAGGGGGAAGTGCCGCCAGTGCAAGGTCGGCATTTCTCCCGTTTATCCTTTCTTCGAGCTTTTGACGGGC
TTGCTTTTTGCCGGAGCATTTCTGTTAAAGGGCTGGAACTATGAGCTTTTGATCGCTCTTACGCTCATCTCTTTGTTTAT
TATTATTACGGTCTCTGATCTGGCTTATATGATCATCCCTGATAGGGTGCTGCTGGTGTTCGCAGGGATTTTTGCTCTCG
AGCGAATCAATCAGCCTCTTATGCCTTGGTGGGCTTCTCTTATCGGTGCAGCTGCTGGATTCATTCTCCTCCTATTAATC
GCTTTCGCAAGTAAGGGTGGCATGGGCGGCGGTGATATCAAGCTTTTTGCGTTGATTGGTTTCGCTGTTGGTTTTAAATC
GATGCTGCTCTCCTTCTTTTTTTCCACCTTCTTTGGGGCTTTTTTCGGAATCATCGGCCTGCTATTTGGTCTGGTAAAGA
AGAAGCAGCCCATTCCATTCGGGCCATTCATCGGCATTGGCACGCTGACTGCATATTTTTTCGGAGAGAAAATAATAGAT
TGGTATCTGAATCTATTGCTTACAGTTTTTTAA

Domains

Predicted by InterproScan.

Type IV leader peptidase family (Peptidase_A24)

(101-204)

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

48.988

98.8

0.484