Detailed information NTG0083464

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8568_RS10700
• Genome accession: NZ_AP026931
• Coordinates: 2089321..2090418 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266670.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701541
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2084321..2095418

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8568_RS10675 (PC1520_20650)	pgsA	2084842..2085387 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8568_RS10680 (PC1520_20660)	rodZ	2085398..2086219 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8568_RS10685 (PC1520_20670)	yfmH	2086261..2087544 (-)	1284	WP_000170213.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8568_RS10690 (PC1520_20680)	yfmF	2087541..2088791 (-)	1251	WP_000424259.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8568_RS10695 (PC1520_20690)	yaaA	2088950..2089318 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8568_RS10700 (PC1520_20700)	recF	2089321..2090418 (+)	1098	WP_000266670.1	DNA replication/repair protein RecF	Machinery gene
R8568_RS10705 (PC1520_20710)	guaB	2090469..2091947 (-)	1479	WP_000073429.1	IMP dehydrogenase	-
R8568_RS10710 (PC1520_20720)	trpS	2092099..2093124 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8568_RS10715 (PC1520_20730)	-	2093330..2094952 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41927.06 Da
• Isoelectric Point: 9.3082

>NTDB_id=83464 R8568_RS10700 WP_000266670.1 2089321..2090418(+) (recF) [Streptococcus pneumoniae strain PZ900701541]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSVQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQNGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=83464 R8568_RS10700 WP_000266670.1 2089321..2090418(+) (recF) [Streptococcus pneumoniae strain PZ900701541]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAGCTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTATCTAAAATCAGTTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGAATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463