Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNK08_RS02175 Genome accession   NZ_CP125983
Coordinates   430390..431340 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain ZKY04     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 425390..436340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK08_RS02150 (QNK08_02165) rapC 426851..427999 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  QNK08_RS02155 (QNK08_02170) phrC 427983..428105 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  QNK08_RS02160 (QNK08_02175) yczM 428204..428293 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  QNK08_RS02165 (QNK08_02180) yczN 428375..428488 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  QNK08_RS02170 (QNK08_02185) thrD 428641..430005 (-) 1365 WP_264379419.1 aspartate kinase -
  QNK08_RS02175 (QNK08_02190) ceuB 430390..431340 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  QNK08_RS02180 (QNK08_02195) yclO 431333..432280 (+) 948 WP_015252820.1 petrobactin ABC transporter permease YclO -
  QNK08_RS02185 (QNK08_02200) yclP 432274..433032 (+) 759 WP_015252819.1 petrobactin ABC transporter ATP-binding protein YclP -
  QNK08_RS02190 (QNK08_02205) yclQ 433054..434007 (+) 954 WP_087614297.1 petrobactin ABC transporter substrate-binding protein YclQ -
  QNK08_RS02195 (QNK08_02210) - 434237..435169 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=834036 QNK08_RS02175 WP_014475804.1 430390..431340(+) (ceuB) [Bacillus subtilis strain ZKY04]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=834036 QNK08_RS02175 WP_014475804.1 430390..431340(+) (ceuB) [Bacillus subtilis strain ZKY04]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525