Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QNK07_RS02345 Genome accession   NZ_CP125981
Coordinates   426026..426424 (-) Length   132 a.a.
NCBI ID   WP_032722902.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY06     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 421026..431424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK07_RS02315 (QNK07_02320) yckA 421726..422406 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  QNK07_RS02320 (QNK07_02325) yckB 422416..423279 (-) 864 WP_029727074.1 transporter substrate-binding domain-containing protein -
  QNK07_RS02325 (QNK07_02330) - 423441..423633 (+) 193 Protein_415 hypothetical protein -
  QNK07_RS02330 (QNK07_02335) - 423669..423989 (+) 321 Protein_416 RDD family protein -
  QNK07_RS02335 (QNK07_02340) yckD 424071..424403 (+) 333 WP_015252849.1 YckD family protein -
  QNK07_RS02340 (QNK07_02345) bglC 424556..425989 (+) 1434 WP_032722901.1 6-phospho-beta-glucosidase -
  QNK07_RS02345 (QNK07_02350) nin/comJ 426026..426424 (-) 399 WP_032722902.1 DNA-entry nuclease inhibitor Regulator
  QNK07_RS02350 (QNK07_02355) nucA/comI 426451..426900 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  QNK07_RS02355 (QNK07_02360) tlpC 427068..428789 (-) 1722 WP_029727077.1 methyl-accepting chemotaxis protein TlpC -
  QNK07_RS02360 (QNK07_02365) hxlB 428900..429457 (-) 558 WP_003234605.1 6-phospho-3-hexuloisomerase -
  QNK07_RS02365 (QNK07_02370) hxlA 429463..430095 (-) 633 WP_032722903.1 3-hexulose-6-phosphate synthase -
  QNK07_RS02370 (QNK07_02375) hxlR 430328..430690 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14961.94 Da        Isoelectric Point: 5.1546

>NTDB_id=833876 QNK07_RS02345 WP_032722902.1 426026..426424(-) (nin/comJ) [Bacillus subtilis strain ZKY06]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAANGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=833876 QNK07_RS02345 WP_032722902.1 426026..426424(-) (nin/comJ) [Bacillus subtilis strain ZKY06]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAAACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985