Detailed information NTG0833709

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: QLH64_RS17105
• Genome accession: NZ_CP125961
• Coordinates: 4026377..4028623 (-)
• Length: 748 a.a.
• NCBI ID: WP_057452015.1
• Uniprot ID: A0A0Q6Y936
• Organism: Pseudomonas brassicacearum strain R401
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4021377..4033623

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLH64_RS17070 (QLH64_17070)	murB	4021761..4022780 (-)	1020	WP_057452018.1	UDP-N-acetylmuramate dehydrogenase	-
QLH64_RS17075 (QLH64_17075)	-	4022777..4023241 (-)	465	WP_057452017.1	low molecular weight protein-tyrosine-phosphatase	-
QLH64_RS17080 (QLH64_17080)	kdsB	4023241..4024005 (-)	765	WP_003204286.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QLH64_RS17085 (QLH64_17085)	-	4024002..4024187 (-)	186	WP_003179363.1	Trm112 family protein	-
QLH64_RS17090 (QLH64_17090)	lpxK	4024211..4025221 (-)	1011	WP_057452016.1	tetraacyldisaccharide 4'-kinase	-
QLH64_RS17095 (QLH64_17095)	-	4025221..4025649 (-)	429	WP_013694002.1	biopolymer transporter ExbD	-
QLH64_RS17100 (QLH64_17100)	exbB	4025646..4026281 (-)	636	WP_162254895.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
QLH64_RS17105 (QLH64_17105)	comA	4026377..4028623 (-)	2247	WP_057452015.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QLH64_RS17110 (QLH64_17110)	-	4028768..4029283 (+)	516	WP_041476071.1	DUF2062 domain-containing protein	-
QLH64_RS17115 (QLH64_17115)	-	4029432..4030211 (-)	780	WP_041476072.1	ABC transporter permease	-
QLH64_RS17120 (QLH64_17120)	-	4030214..4031146 (-)	933	WP_057452014.1	ABC transporter ATP-binding protein	-
QLH64_RS17125 (QLH64_17125)	-	4031283..4031906 (-)	624	WP_057452108.1	glutathione S-transferase	-
QLH64_RS17130 (QLH64_17130)	-	4031951..4032610 (-)	660	WP_057452013.1	transglutaminase family protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81137.15 Da
• Isoelectric Point: 9.6864

>NTDB_id=833709 QLH64_RS17105 WP_057452015.1 4026377..4028623(-) (comA) [Pseudomonas brassicacearum strain R401]
MRTGLVALALGLLAPIFLPALPSLWLIAAMPMLALMALPFRTYPLGFFLFGLAWACLSAQFALDDRLPIALDGETRWVEG
RVVGLPQQGEGVVRFELADVHSRRTRLPTAMRLAWFGGPPVNSGERWRLAVKLKRPSGLRNPHGFDYAAWLLSRGIGATG
TIKDGHLLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPEGLAWLPWACGLAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPVPLMGEGLLWIAGGLLDLLFKGLTLVAGRMPAWVPAAVPPWALGIAAVGAFLLLLPKGVPLRVLGWPMMLLMV
FPPQEHLPQGQAEIWQLDVGQGLAVLVRTQHHSLLYDAGPRFGEADAGERVVLPTLRKLGVRGLDLMLLSHADADHAGGA
RAVRNGLPTREVISGDSDALPAELLAGPCESGRRWEWDGVRFELWRWASAVESNQKSCVLRVEAGGERLLLTGDIDTPAE
RALLDESLAAPIQWLAAPHHGSRSSSSMALLSRLMPHSVLISRGQGNAFGHPHPQVMARYRRSGLAVYDSAEQGAIRLQL
GAFEGPRTEAGRRRYWRDPPAVGPPGQY

Nucleotide

• Length: 2247 bp

>NTDB_id=833709 QLH64_RS17105 WP_057452015.1 4026377..4028623(-) (comA) [Pseudomonas brassicacearum strain R401]
ATGCGCACAGGATTAGTCGCGCTTGCACTGGGGCTGTTGGCCCCGATTTTTTTGCCGGCACTGCCGTCGTTGTGGCTGAT
TGCAGCCATGCCGATGCTCGCGCTGATGGCGTTGCCGTTTCGAACCTACCCTCTGGGTTTTTTCCTGTTCGGGCTGGCCT
GGGCCTGCCTGTCGGCGCAGTTTGCGTTGGACGACCGGTTACCCATCGCGCTTGACGGCGAAACCCGCTGGGTCGAGGGT
CGCGTGGTCGGTTTGCCGCAACAGGGCGAAGGCGTGGTGCGCTTCGAACTGGCCGATGTCCATTCACGCCGTACCCGCCT
ACCGACGGCGATGCGTCTCGCCTGGTTTGGTGGTCCGCCGGTCAACAGCGGCGAACGATGGCGATTGGCGGTGAAGCTCA
AGCGGCCCAGCGGGCTGCGGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGCTGAGCCGCGGTATCGGCGCGACCGGC
ACGATCAAGGATGGCCATCTCCTGCAAGCGGCCCGGGGGGCCTGGCGCGACGAGGTGCGCCAGGCGCTGGCACAGGTCGA
TGCCCACGGCCGCTCCGGAGCGCTGGCGGCGTTGGTCCTGGGCGACGGCGGCGGGCTGAGTCGCGAGGATTGGCAGGTGC
TGCAAGACACCGGCACCGTCCATTTGCTGGTGATCTCCGGGCAACACATCGGCCTGCTCGCCGGCCTGGTGTACTTGTTG
GTGGCCGGTGCGGCGCGTTATGGCCTGTGGCCGGAGGGGCTGGCCTGGTTGCCGTGGGCCTGTGGGCTGGCCTTCTGTGC
CGCCCTGGGCTACGGCCTGCTCGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGCGCAATGATCGGCCTGGTGTTGCTGT
GGCGCTTGCGTTTCAAACAGCCAGATCCGTGGTGGGCCTGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTT
GCCAGCTTGCGGCCGGGGTTCTGGTTGTCGTTTGCAGCCGTGGCCATCTTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
GTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTTGCGCTCGGCCTGTGTCCGTTGCTGTTGATCGTGGGCT
TGCCGGTCAGCCTCAGCGGGCCGCTGGTGAACCTGCTCGCGGTGCCTTGGATCAGCCTGTTGGTCTTGCCGCCAGCGTTG
CTCGGCACGGCGTTGTTGCCGGTGCCGCTCATGGGCGAAGGCCTGCTGTGGATCGCCGGCGGGCTGCTCGATCTGCTGTT
CAAGGGGCTGACGCTGGTTGCCGGACGAATGCCGGCCTGGGTCCCTGCCGCAGTCCCGCCGTGGGCCTTGGGTATCGCCG
CCGTCGGTGCTTTTTTGCTGCTGTTGCCCAAAGGTGTGCCGCTGCGTGTGCTGGGGTGGCCGATGATGTTGCTGATGGTT
TTTCCTCCGCAAGAACACCTGCCCCAAGGGCAAGCCGAGATCTGGCAATTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGGACCCAGCATCACAGCCTGCTTTACGATGCCGGGCCGCGCTTTGGCGAGGCTGACGCGGGCGAACGGGTCGTCCTGC
CGACCTTGCGCAAACTGGGTGTGCGCGGCTTGGACCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGTGCC
CGCGCCGTGCGCAATGGGCTGCCGACGCGGGAAGTGATCAGCGGCGATTCCGACGCGCTGCCCGCCGAGCTGCTGGCCGG
CCCTTGTGAAAGCGGTAGGCGTTGGGAATGGGACGGGGTCAGGTTCGAGCTGTGGCGGTGGGCCTCTGCCGTTGAAAGCA
ACCAGAAGTCCTGCGTCCTGCGGGTGGAGGCCGGCGGCGAACGCCTGCTGCTGACCGGCGATATCGACACCCCTGCCGAA
CGGGCCTTGCTCGACGAGTCCCTGGCGGCGCCGATCCAGTGGCTGGCCGCGCCGCATCACGGCAGCCGCAGTTCGTCGTC
GATGGCGTTGCTGTCACGTCTCATGCCGCATTCGGTATTGATCTCCCGGGGGCAGGGCAACGCGTTCGGCCACCCTCATC
CCCAGGTGATGGCCCGGTATCGACGCTCGGGCCTGGCGGTCTACGACAGCGCCGAGCAGGGCGCCATTCGTCTGCAACTG
GGTGCTTTCGAGGGGCCGCGCACCGAGGCCGGGCGCCGCCGCTACTGGCGCGATCCGCCAGCCGTCGGGCCACCGGGGCA
ATATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-671)

• Domain of unknown function (DUF4131) (DUF4131) (22-165)

• Competence protein (Competence) (198-464)

3D structure

• AlphaFold DB: A0A0Q6Y936

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.034	95.722	0.584