Detailed information NTG0083348

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8624_RS10395
• Genome accession: NZ_AP026930
• Coordinates: 2019189..2020286 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266667.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701208
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2014189..2025286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8624_RS10370 (PC1195_20060)	pgsA	2014710..2015255 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8624_RS10375 (PC1195_20070)	rodZ	2015266..2016087 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8624_RS10380 (PC1195_20080)	yfmH	2016129..2017412 (-)	1284	WP_050311765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8624_RS10385 (PC1195_20090)	yfmF	2017409..2018659 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8624_RS10390 (PC1195_20100)	yaaA	2018818..2019186 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8624_RS10395 (PC1195_20110)	recF	2019189..2020286 (+)	1098	WP_000266667.1	DNA replication/repair protein RecF	Machinery gene
R8624_RS10400 (PC1195_20120)	guaB	2020337..2021815 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8624_RS10405 (PC1195_20130)	trpS	2021967..2022992 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8624_RS10410 (PC1195_20140)	-	2023198..2024820 (+)	1623	WP_000958760.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41944.01 Da
• Isoelectric Point: 8.6746

>NTDB_id=83348 R8624_RS10395 WP_000266667.1 2019189..2020286(+) (recF) [Streptococcus pneumoniae strain PZ900701208]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=83348 R8624_RS10395 WP_000266667.1 2019189..2020286(+) (recF) [Streptococcus pneumoniae strain PZ900701208]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAAGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46