Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | QM316_RS02485 | Genome accession | NZ_CP125862 |
| Coordinates | 460462..460761 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844415.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 18-02202-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 455462..465761
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QM316_RS02445 (QM316_02440) | - | 455523..455726 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| QM316_RS02450 (QM316_02445) | - | 455723..456709 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| QM316_RS02455 (QM316_02450) | - | 456709..457038 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| QM316_RS02460 (QM316_02455) | - | 457035..457658 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| QM316_RS02465 (QM316_02460) | comGA | 457710..458684 (+) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QM316_RS02470 (QM316_02465) | comGB | 458656..459726 (+) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QM316_RS02475 (QM316_02470) | comGC | 459740..460051 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QM316_RS02480 (QM316_02475) | comGD | 460029..460475 (+) | 447 | WP_151367112.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| QM316_RS02485 (QM316_02480) | comGE | 460462..460761 (+) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| QM316_RS02490 (QM316_02485) | comGF | 460679..461176 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| QM316_RS02495 (QM316_02490) | - | 461273..461419 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| QM316_RS02500 (QM316_02495) | - | 461409..461933 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| QM316_RS02505 (QM316_02500) | gcvT | 462092..463183 (+) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| QM316_RS02510 (QM316_02505) | gcvPA | 463203..464549 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11135.28 Da Isoelectric Point: 9.9215
>NTDB_id=833101 QM316_RS02485 WP_000844415.1 460462..460761(+) (comGE) [Staphylococcus aureus strain 18-02202-1]
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=833101 QM316_RS02485 WP_000844415.1 460462..460761(+) (comGE) [Staphylococcus aureus strain 18-02202-1]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |