Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QM316_RS00525 Genome accession   NZ_CP125862
Coordinates   94790..95833 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 18-02202-1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 89790..100833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM316_RS00495 (QM316_00490) - 90351..90461 (+) 111 WP_001790257.1 hypothetical protein -
  QM316_RS00500 (QM316_00495) - 90490..90903 (+) 414 WP_025174475.1 hypothetical protein -
  QM316_RS00505 (QM316_00500) - 91092..92078 (-) 987 WP_000999713.1 aromatic acid exporter family protein -
  QM316_RS00510 (QM316_00505) map 92716..93474 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  QM316_RS00515 (QM316_00510) - 93691..94077 (+) 387 WP_001110179.1 hypothetical protein -
  QM316_RS00520 (QM316_00515) liaF 94092..94793 (+) 702 WP_000149068.1 cell wall-active antibiotics response protein LiaF -
  QM316_RS00525 (QM316_00520) vraS 94790..95833 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  QM316_RS00530 (QM316_00525) vraR 95823..96452 (+) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  QM316_RS00535 (QM316_00530) - 96565..97782 (-) 1218 WP_000037088.1 YihY/virulence factor BrkB family protein -
  QM316_RS00540 (QM316_00535) - 98060..98335 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  QM316_RS00545 (QM316_00540) - 98342..98806 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  QM316_RS00550 (QM316_00545) - 98953..99153 (+) 201 WP_000180462.1 DUF1128 family protein -
  QM316_RS00555 (QM316_00550) - 99156..100412 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=833085 QM316_RS00525 WP_001017131.1 94790..95833(+) (vraS) [Staphylococcus aureus strain 18-02202-1]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=833085 QM316_RS00525 WP_001017131.1 94790..95833(+) (vraS) [Staphylococcus aureus strain 18-02202-1]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATT
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCGGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1