Detailed information NTG0832975

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QMY17_RS20040
• Genome accession: NZ_CP125812
• Coordinates: 3726663..3727811 (-)
• Length: 382 a.a.
• NCBI ID: WP_014475800.1
• Uniprot ID: A0A0D1KXJ1
• Organism: Bacillus subtilis strain N3378-3At
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3721663..3732811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMY17_RS20010	yclO	3722376..3723323 (-)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-
QMY17_RS20015	ceuB	3723316..3724266 (-)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
QMY17_RS20020	thrD	3724657..3726021 (+)	1365	WP_014478832.1	aspartate kinase	-
QMY17_RS20025	yczN	3726174..3726287 (+)	114	WP_014478831.1	YjcZ family sporulation protein	-
QMY17_RS20030	yczM	3726369..3726458 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
QMY17_RS20035	phrC	3726557..3726679 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
QMY17_RS20040	rapC	3726663..3727811 (-)	1149	WP_014475800.1	response regulator aspartate phosphatase RapC	Regulator
QMY17_RS20045	yclK	3727974..3729395 (-)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
QMY17_RS20050	yclJ	3729382..3730065 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
QMY17_RS20055	yclI	3730278..3731738 (+)	1461	WP_014478827.1	ABC transporter permease	-
QMY17_RS20060	yclH	3731754..3732434 (+)	681	WP_014478826.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.65 Da
• Isoelectric Point: 4.9618

>NTDB_id=832975 QMY17_RS20040 WP_014475800.1 3726663..3727811(-) (rapC) [Bacillus subtilis strain N3378-3At]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=832975 QMY17_RS20040 WP_014475800.1 3726663..3727811(-) (rapC) [Bacillus subtilis strain N3378-3At]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: A0A0D1KXJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568