Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QMY17_RS20015 Genome accession   NZ_CP125812
Coordinates   3723316..3724266 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain N3378-3At     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3718316..3729266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS19995 - 3719487..3720419 (-) 933 WP_014478835.1 restriction endonuclease -
  QMY17_RS20000 yclQ 3720649..3721602 (-) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  QMY17_RS20005 yclP 3721624..3722382 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  QMY17_RS20010 yclO 3722376..3723323 (-) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  QMY17_RS20015 ceuB 3723316..3724266 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  QMY17_RS20020 thrD 3724657..3726021 (+) 1365 WP_014478832.1 aspartate kinase -
  QMY17_RS20025 yczN 3726174..3726287 (+) 114 WP_014478831.1 YjcZ family sporulation protein -
  QMY17_RS20030 yczM 3726369..3726458 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  QMY17_RS20035 phrC 3726557..3726679 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  QMY17_RS20040 rapC 3726663..3727811 (-) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=832973 QMY17_RS20015 WP_014475804.1 3723316..3724266(-) (ceuB) [Bacillus subtilis strain N3378-3At]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=832973 QMY17_RS20015 WP_014475804.1 3723316..3724266(-) (ceuB) [Bacillus subtilis strain N3378-3At]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525