Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   QMY17_RS02145 Genome accession   NZ_CP125812
Coordinates   418977..419096 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain N3378-3At     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 413977..424096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS02125 pbpG 414347..416422 (-) 2076 WP_014481227.1 transglycosylase domain-containing protein -
  QMY17_RS02130 speE 416624..417454 (+) 831 WP_003227543.1 spermidine synthase -
  QMY17_RS02135 speB 417515..418387 (+) 873 WP_003227545.1 agmatinase -
  QMY17_RS02140 - 418452..418879 (-) 428 Protein_415 YbaK/EbsC family protein -
  QMY17_RS02145 phrF 418977..419096 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  QMY17_RS02150 rapF 419080..420225 (-) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  QMY17_RS02155 - 420228..420458 (+) 231 Protein_418 hypothetical protein -
  QMY17_RS02160 ywhK 420455..421810 (+) 1356 WP_014481224.1 YncE family protein -
  QMY17_RS02165 ywhL 421849..423225 (+) 1377 WP_014481223.1 YncE family protein -
  QMY17_RS02170 albG 423231..423932 (-) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=832909 QMY17_RS02145 WP_009968329.1 418977..419096(-) (phrF) [Bacillus subtilis strain N3378-3At]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=832909 QMY17_RS02145 WP_009968329.1 418977..419096(-) (phrF) [Bacillus subtilis strain N3378-3At]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487