Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   QLQ05_RS02100 Genome accession   NZ_CP125762
Coordinates   403506..403625 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain KRS015     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 398506..408625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS02080 pbpG 398862..400937 (-) 2076 WP_003227540.1 transglycosylase domain-containing protein -
  QLQ05_RS02085 speE 401139..401969 (+) 831 WP_003227543.1 spermidine synthase -
  QLQ05_RS02090 speB 402030..402902 (+) 873 WP_003227545.1 agmatinase -
  QLQ05_RS02095 ywhH 402934..403407 (-) 474 WP_003227547.1 YbaK/EbsC family protein -
  QLQ05_RS02100 phrF 403506..403625 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  QLQ05_RS02105 rapF 403609..404754 (-) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  QLQ05_RS23095 - 404757..404987 (+) 231 WP_009968328.1 hypothetical protein -
  QLQ05_RS02110 ywhK 404984..406339 (+) 1356 WP_003227552.1 YncE family protein -
  QLQ05_RS02115 ywhL 406378..407754 (+) 1377 WP_003244415.1 YncE family protein -
  QLQ05_RS02120 albG 407760..408461 (-) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=832675 QLQ05_RS02100 WP_009968329.1 403506..403625(-) (phrF) [Bacillus subtilis strain KRS015]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=832675 QLQ05_RS02100 WP_009968329.1 403506..403625(-) (phrF) [Bacillus subtilis strain KRS015]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487