Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   QLH32_RS09650 Genome accession   NZ_CP125669
Coordinates   2036071..2037636 (+) Length   521 a.a.
NCBI ID   WP_283266064.1    Uniprot ID   -
Organism   Acinetobacter sp. KCTC 92772     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2031071..2042636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLH32_RS09630 (QLH32_09630) thrC 2031814..2032953 (+) 1140 WP_283266061.1 threonine synthase -
  QLH32_RS09635 (QLH32_09635) - 2033013..2033915 (-) 903 WP_283266062.1 hypothetical protein -
  QLH32_RS09640 (QLH32_09640) pbpG 2034131..2035207 (-) 1077 WP_283266063.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  QLH32_RS09645 (QLH32_09645) - 2035419..2036054 (+) 636 WP_267981582.1 response regulator -
  QLH32_RS09650 (QLH32_09650) pilS 2036071..2037636 (+) 1566 WP_283266064.1 ATP-binding protein Regulator
  QLH32_RS09655 (QLH32_09655) pilR 2037659..2039092 (+) 1434 WP_283266065.1 sigma-54 dependent transcriptional regulator Regulator
  QLH32_RS09660 (QLH32_09660) - 2039139..2040317 (-) 1179 WP_283266066.1 S41 family peptidase -
  QLH32_RS09665 (QLH32_09665) gpmI 2040389..2041933 (-) 1545 WP_283266067.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59205.06 Da        Isoelectric Point: 6.7735

>NTDB_id=832341 QLH32_RS09650 WP_283266064.1 2036071..2037636(+) (pilS) [Acinetobacter sp. KCTC 92772]
MLGQIASSISQTIYRLGIWYSGYRLIISVSLILIYVLTAEQLGNNYQYPFLYFYTLLCYICINIFQLFLLKLLPLQITKQ
LIFVFIVDVICLSMITFSAGGPNLQLSLLYVIIIFSSAILLNAQLSLIVTLFAVIMVVYQRFLGNFFDYNNLNHLGNSAL
LAFLFFVVHAIGRIAVQRFKILETLTFHQSIEIHQLQNINRYILEQIEDGYLVLDESSHIVLSNPAANTLLGVHFPISAE
KTPLIKWQPDLFELIRLSDLKDGEEFSFESQQSPYTVNVKVKHLIVPEQSLILLILKDAQKLNQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELLKESDAHQQDMLSRMIGKQAKRIDSIIQDTLEMARNKPTEAQVIHLTDFFGSLLNEDLADAK
QQIQLNLPERASILFDEKQLRQVMINLIRNALRHNAADAEYIEVQVHLKEGRTCIDVIDFGTGVAKRDISQLFKPFFSTE
IKGTGLGLYLSHSFCEANHAKLTYVERQQGACFRIECSKIH

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=832341 QLH32_RS09650 WP_283266064.1 2036071..2037636(+) (pilS) [Acinetobacter sp. KCTC 92772]
ATGTTGGGACAAATTGCCTCCTCTATATCACAAACCATCTATCGACTAGGGATCTGGTATAGTGGTTATCGCCTGATTAT
TTCAGTCAGCCTGATCCTGATTTATGTACTTACCGCAGAACAACTAGGCAACAACTATCAATACCCCTTTCTCTATTTTT
ATACACTGCTGTGTTATATCTGCATCAATATTTTCCAGCTCTTTTTACTGAAACTACTTCCACTGCAAATCACCAAGCAA
CTGATCTTTGTCTTTATTGTTGATGTAATTTGCCTGAGCATGATTACATTTTCAGCAGGTGGGCCAAACCTCCAGCTTAG
CCTGCTCTATGTTATTATTATTTTTTCATCCGCCATTTTGCTTAATGCCCAGTTGTCTTTGATCGTGACGCTGTTCGCAG
TAATTATGGTGGTTTACCAGCGTTTTCTGGGTAATTTTTTTGACTACAATAATTTAAATCATCTCGGCAATAGTGCTCTC
CTTGCCTTTCTATTTTTTGTGGTGCATGCGATTGGCCGTATTGCGGTGCAACGCTTTAAAATTCTGGAAACCTTAACTTT
CCACCAATCTATCGAGATCCATCAACTCCAGAACATTAACCGCTATATTCTCGAACAGATCGAGGATGGTTATCTGGTGC
TGGATGAAAGCAGCCATATTGTACTCAGCAATCCCGCCGCCAATACCCTGCTGGGTGTTCATTTTCCCATTTCGGCGGAA
AAAACACCACTGATCAAATGGCAGCCCGACCTGTTCGAACTGATCAGGCTCAGTGACCTGAAAGATGGTGAGGAATTTAG
TTTTGAATCGCAGCAAAGCCCTTATACCGTCAATGTAAAGGTTAAACACCTCATCGTTCCTGAACAGTCTCTCATTTTAT
TGATTTTAAAAGATGCACAGAAACTTAACCAGCAAGTCCAGCAATTGAAACTGGCGGCTTTAGGACAGCTCTCAGCCAGT
ATCGCTCACGAAATTCGCAACCCTCTGGCTGCAATTGTACAGGCCAATGAACTGCTCAAGGAAAGTGATGCCCATCAGCA
GGACATGCTTTCACGCATGATTGGCAAACAGGCCAAGCGGATTGACAGCATCATTCAGGATACGCTGGAAATGGCACGCA
ACAAGCCGACAGAGGCGCAGGTCATTCACCTGACTGATTTTTTTGGTAGCCTACTCAATGAAGATTTGGCTGATGCAAAA
CAACAGATTCAGCTCAATCTTCCCGAACGAGCCAGTATCCTGTTTGATGAAAAACAGTTAAGGCAGGTCATGATCAACCT
GATTCGCAATGCATTGAGACATAATGCCGCAGATGCCGAATATATTGAGGTGCAGGTGCATTTAAAAGAGGGACGAACCT
GTATTGATGTCATTGATTTTGGTACAGGCGTGGCAAAACGTGATATTTCTCAGCTATTCAAGCCATTTTTTAGTACCGAA
ATTAAAGGAACTGGTTTAGGATTGTACCTGTCTCATAGCTTTTGTGAGGCAAATCATGCAAAGCTCACCTATGTAGAGCG
ACAACAAGGAGCATGTTTCAGGATTGAATGCTCAAAAATTCATTGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

67.442

99.04

0.668