Detailed information NTG0083232

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8615_RS10635
• Genome accession: NZ_AP026929
• Coordinates: 2067213..2068310 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266669.1
• Uniprot ID: C1CBK4
• Organism: Streptococcus pneumoniae strain PZ900701114
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2062213..2073310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8615_RS10610 (PC1101_20580)	pgsA	2062734..2063279 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8615_RS10615 (PC1101_20590)	rodZ	2063290..2064111 (-)	822	WP_001227957.1	cytoskeleton protein RodZ	-
R8615_RS10620 (PC1101_20600)	yfmH	2064153..2065436 (-)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8615_RS10625 (PC1101_20610)	yfmF	2065433..2066683 (-)	1251	WP_000424267.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8615_RS10630 (PC1101_20620)	yaaA	2066842..2067210 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8615_RS10635 (PC1101_20630)	recF	2067213..2068310 (+)	1098	WP_000266669.1	DNA replication/repair protein RecF	Machinery gene
R8615_RS10640 (PC1101_20640)	guaB	2068361..2069839 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8615_RS10645 (PC1101_20650)	trpS	2069991..2071016 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8615_RS10650 (PC1101_20660)	-	2071222..2072844 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41960.00 Da
• Isoelectric Point: 8.6746

>NTDB_id=83232 R8615_RS10635 WP_000266669.1 2067213..2068310(+) (recF) [Streptococcus pneumoniae strain PZ900701114]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=83232 R8615_RS10635 WP_000266669.1 2067213..2068310(+) (recF) [Streptococcus pneumoniae strain PZ900701114]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: C1CBK4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46