Detailed information NTG0831906

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U0535_RS17635
• Genome accession: NZ_CP139846
• Coordinates: 3022013..3022996 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain Nord58
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3017013..3027996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0535_RS17610 (U0535_17610)	-	3018161..3018268 (-)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0535_RS17615 (U0535_17615)	-	3018644..3018751 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0535_RS17620 (U0535_17620)	-	3019128..3019235 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0535_RS17625 (U0535_17625)	yhjV	3019711..3020982 (+)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
U0535_RS17630 (U0535_17630)	dppF	3021012..3022016 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U0535_RS17635 (U0535_17635)	amiE	3022013..3022996 (-)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
U0535_RS17640 (U0535_17640)	dppC	3023007..3023909 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
U0535_RS17645 (U0535_17645)	dppB	3023919..3024938 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
U0535_RS17650 (U0535_17650)	dppA	3025089..3026696 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=831906 U0535_RS17635 WP_001196487.1 3022013..3022996(-) (amiE) [Escherichia coli strain Nord58]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=831906 U0535_RS17635 WP_001196487.1 3022013..3022996(-) (amiE) [Escherichia coli strain Nord58]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407