Detailed information
Bioinformatically predicted
Overview
| Name | CJE1441 | Type | Regulator |
| Locus tag | QMK16_RS06410 | Genome accession | NZ_CP125396 |
| Coordinates | 1230706..1231359 (+) | Length | 217 a.a. |
| NCBI ID | WP_011049930.1 | Uniprot ID | A0A3X8NAQ4 |
| Organism | Campylobacter jejuni strain SKBC57 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1212589..1256183 | 1230706..1231359 | within | 0 |
Gene organization within MGE regions
Location: 1212589..1256183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK16_RS06270 (QMK16_06270) | - | 1212589..1213782 (-) | 1194 | WP_002853860.1 | M23 family metallopeptidase | - |
| QMK16_RS06275 (QMK16_06275) | - | 1213779..1214585 (-) | 807 | WP_002853622.1 | FtsX-like permease family protein | - |
| QMK16_RS06280 (QMK16_06280) | - | 1214572..1215237 (-) | 666 | WP_002853534.1 | ABC transporter ATP-binding protein | - |
| QMK16_RS06285 (QMK16_06285) | trmB | 1215307..1216485 (-) | 1179 | WP_002858203.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| QMK16_RS06290 (QMK16_06290) | - | 1216485..1217720 (-) | 1236 | WP_014516824.1 | fibronectin type III domain-containing protein | - |
| QMK16_RS06295 (QMK16_06295) | - | 1217665..1218633 (-) | 969 | WP_002858282.1 | RluA family pseudouridine synthase | - |
| QMK16_RS06300 (QMK16_06300) | mrdB | 1218711..1219811 (+) | 1101 | WP_002853654.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| QMK16_RS06310 (QMK16_06310) | - | 1220150..1221325 (+) | 1176 | WP_002787311.1 | site-specific integrase | - |
| QMK16_RS06315 (QMK16_06315) | - | 1221322..1221528 (-) | 207 | WP_002787309.1 | helix-turn-helix domain-containing protein | - |
| QMK16_RS06320 (QMK16_06320) | - | 1221530..1221883 (-) | 354 | WP_002787307.1 | hypothetical protein | - |
| QMK16_RS06325 (QMK16_06325) | - | 1221901..1222656 (-) | 756 | WP_002787306.1 | site-specific DNA-methyltransferase | - |
| QMK16_RS06330 (QMK16_06330) | - | 1222634..1222900 (-) | 267 | WP_002787304.1 | hypothetical protein | - |
| QMK16_RS06335 (QMK16_06335) | - | 1222884..1223255 (-) | 372 | WP_002858334.1 | hypothetical protein | - |
| QMK16_RS06340 (QMK16_06340) | - | 1223256..1223480 (-) | 225 | WP_011049924.1 | hypothetical protein | - |
| QMK16_RS06345 (QMK16_06345) | - | 1223489..1224250 (-) | 762 | WP_002869676.1 | hypothetical protein | - |
| QMK16_RS06350 (QMK16_06350) | - | 1224187..1224501 (-) | 315 | WP_283147446.1 | hypothetical protein | - |
| QMK16_RS06355 (QMK16_06355) | - | 1224580..1224900 (-) | 321 | WP_002787293.1 | hypothetical protein | - |
| QMK16_RS06360 (QMK16_06360) | - | 1225288..1225524 (-) | 237 | WP_002787289.1 | hypothetical protein | - |
| QMK16_RS06365 (QMK16_06365) | - | 1225538..1226305 (-) | 768 | WP_002787287.1 | hypothetical protein | - |
| QMK16_RS06370 (QMK16_06370) | - | 1226443..1226673 (-) | 231 | WP_002787283.1 | hypothetical protein | - |
| QMK16_RS06375 (QMK16_06375) | - | 1226639..1226902 (-) | 264 | WP_002787281.1 | hypothetical protein | - |
| QMK16_RS06380 (QMK16_06380) | - | 1226959..1227246 (-) | 288 | WP_002787279.1 | YopX family protein | - |
| QMK16_RS06385 (QMK16_06385) | - | 1227299..1228030 (-) | 732 | WP_011049928.1 | phage regulatory protein/antirepressor Ant | - |
| QMK16_RS06390 (QMK16_06390) | - | 1228461..1228745 (-) | 285 | WP_002912332.1 | hypothetical protein | - |
| QMK16_RS06395 (QMK16_06395) | - | 1228742..1228945 (-) | 204 | WP_002870299.1 | hypothetical protein | - |
| QMK16_RS06400 (QMK16_06400) | - | 1229150..1229803 (+) | 654 | WP_002870336.1 | hypothetical protein | - |
| QMK16_RS06405 (QMK16_06405) | - | 1230038..1230700 (+) | 663 | WP_002870274.1 | S24/S26 family peptidase | - |
| QMK16_RS06410 (QMK16_06410) | CJE1441 | 1230706..1231359 (+) | 654 | WP_011049930.1 | DNA/RNA non-specific endonuclease | Regulator |
| QMK16_RS06415 (QMK16_06415) | - | 1231376..1231657 (+) | 282 | WP_002870263.1 | PLDc N-terminal domain-containing protein | - |
| QMK16_RS06420 (QMK16_06420) | - | 1231671..1231868 (-) | 198 | WP_002913413.1 | hypothetical protein | - |
| QMK16_RS06425 (QMK16_06425) | - | 1231786..1232205 (-) | 420 | WP_002870261.1 | hypothetical protein | - |
| QMK16_RS06430 (QMK16_06430) | - | 1232434..1232895 (-) | 462 | WP_002870260.1 | DUF5675 family protein | - |
| QMK16_RS06435 (QMK16_06435) | - | 1232944..1234227 (-) | 1284 | WP_002788854.1 | hypothetical protein | - |
| QMK16_RS06440 (QMK16_06440) | - | 1234224..1234598 (-) | 375 | WP_019108750.1 | DUF1353 domain-containing protein | - |
| QMK16_RS06445 (QMK16_06445) | - | 1234591..1234974 (-) | 384 | WP_002869963.1 | hypothetical protein | - |
| QMK16_RS06450 (QMK16_06450) | - | 1234971..1235606 (-) | 636 | WP_002789149.1 | DUF4376 domain-containing protein | - |
| QMK16_RS06455 (QMK16_06455) | - | 1235619..1236068 (-) | 450 | WP_002798141.1 | hypothetical protein | - |
| QMK16_RS06460 (QMK16_06460) | - | 1236070..1237635 (-) | 1566 | WP_011049933.1 | hypothetical protein | - |
| QMK16_RS06465 (QMK16_06465) | - | 1237628..1238260 (-) | 633 | WP_002869967.1 | hypothetical protein | - |
| QMK16_RS06470 (QMK16_06470) | - | 1238257..1238574 (-) | 318 | WP_002788295.1 | head-tail adaptor protein | - |
| QMK16_RS06475 (QMK16_06475) | - | 1238587..1239024 (-) | 438 | WP_002788293.1 | phage gp6-like head-tail connector protein | - |
| QMK16_RS06480 (QMK16_06480) | - | 1239021..1239272 (-) | 252 | WP_002788291.1 | hypothetical protein | - |
| QMK16_RS06485 (QMK16_06485) | - | 1239283..1240449 (-) | 1167 | WP_002788288.1 | phage major capsid protein | - |
| QMK16_RS06490 (QMK16_06490) | - | 1240466..1241023 (-) | 558 | WP_002788287.1 | HK97 family phage prohead protease | - |
| QMK16_RS06495 (QMK16_06495) | - | 1241267..1241977 (-) | 711 | WP_218979316.1 | hypothetical protein | - |
| QMK16_RS06500 (QMK16_06500) | - | 1241990..1247689 (-) | 5700 | WP_019108749.1 | hypothetical protein | - |
| QMK16_RS06505 (QMK16_06505) | - | 1247749..1248087 (+) | 339 | WP_002788283.1 | hypothetical protein | - |
| QMK16_RS06510 (QMK16_06510) | - | 1248079..1248294 (-) | 216 | WP_002788282.1 | hypothetical protein | - |
| QMK16_RS06515 (QMK16_06515) | - | 1248375..1248731 (-) | 357 | WP_002788281.1 | hypothetical protein | - |
| QMK16_RS06520 (QMK16_06520) | - | 1248728..1249708 (-) | 981 | WP_002788279.1 | hypothetical protein | - |
| QMK16_RS06525 (QMK16_06525) | - | 1249855..1250079 (+) | 225 | WP_002869970.1 | DUF6290 family protein | - |
| QMK16_RS06530 (QMK16_06530) | - | 1250076..1250339 (+) | 264 | WP_002869971.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QMK16_RS06535 (QMK16_06535) | - | 1250327..1250677 (-) | 351 | WP_002788276.1 | hypothetical protein | - |
| QMK16_RS06540 (QMK16_06540) | - | 1250678..1251220 (-) | 543 | WP_002800770.1 | HK97 gp10 family phage protein | - |
| QMK16_RS06545 (QMK16_06545) | - | 1251217..1252389 (-) | 1173 | WP_002788272.1 | phage portal protein | - |
| QMK16_RS06550 (QMK16_06550) | - | 1252549..1252983 (-) | 435 | WP_002913302.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QMK16_RS06555 (QMK16_06555) | - | 1253038..1254663 (-) | 1626 | WP_002913304.1 | terminase TerL endonuclease subunit | - |
| QMK16_RS06560 (QMK16_06560) | - | 1254667..1255305 (-) | 639 | WP_002913306.1 | P27 family phage terminase small subunit | - |
| QMK16_RS06565 (QMK16_06565) | - | 1255556..1255906 (-) | 351 | WP_002869973.1 | HNH endonuclease signature motif containing protein | - |
| QMK16_RS06570 (QMK16_06570) | - | 1255893..1256183 (-) | 291 | WP_002788257.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25531.02 Da Isoelectric Point: 9.8742
>NTDB_id=831898 QMK16_RS06410 WP_011049930.1 1230706..1231359(+) (CJE1441) [Campylobacter jejuni strain SKBC57]
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF
MKKLIILSLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYINCYDYSLKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHDVENENLRIYKVKCDNF
Nucleotide
Download Length: 654 bp
>NTDB_id=831898 QMK16_RS06410 WP_011049930.1 1230706..1231359(+) (CJE1441) [Campylobacter jejuni strain SKBC57]
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA
ATGAAAAAACTTATAATCTTATCTTTATTATCCACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTGGATAAATTTTATTATATTAATTGTTATGATTATTCTTTAA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTACGACAGGGGACACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGCAACATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAAAAACAATATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCTAATCACGATGTAGAAAATGAGAATTTAAGAATATATAAAGTAAAAT
GTGACAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE1441 | Campylobacter jejuni RM1221 |
100 |
100 |
1 |
| CJE0566 | Campylobacter jejuni RM1221 |
91.163 |
99.078 |
0.903 |