Detailed information NTG0831510

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: QMK48_RS19925
• Genome accession: NZ_CP125374
• Coordinates: 4526139..4528385 (-)
• Length: 748 a.a.
• NCBI ID: WP_320389266.1
• Uniprot ID: -
• Organism: Pseudomonas sp. P9_32
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4521139..4533385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK48_RS19890 (QMK48_19880)	murB	4521523..4522542 (-)	1020	WP_320389265.1	UDP-N-acetylmuramate dehydrogenase	-
QMK48_RS19895 (QMK48_19885)	-	4522539..4523003 (-)	465	WP_014339516.1	low molecular weight protein-tyrosine-phosphatase	-
QMK48_RS19900 (QMK48_19890)	kdsB	4523003..4523767 (-)	765	WP_053189634.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QMK48_RS19905 (QMK48_19895)	-	4523764..4523949 (-)	186	WP_003174668.1	Trm112 family protein	-
QMK48_RS19910 (QMK48_19900)	lpxK	4523973..4524983 (-)	1011	WP_258689035.1	tetraacyldisaccharide 4'-kinase	-
QMK48_RS19915 (QMK48_19905)	-	4524983..4525411 (-)	429	WP_214509707.1	ExbD/TolR family protein	-
QMK48_RS19920 (QMK48_19910)	exbB	4525408..4526043 (-)	636	WP_170845976.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
QMK48_RS19925 (QMK48_19915)	comA	4526139..4528385 (-)	2247	WP_320389266.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QMK48_RS19930 (QMK48_19920)	-	4528530..4529045 (+)	516	WP_003204298.1	DUF2062 domain-containing protein	-
QMK48_RS19935 (QMK48_19925)	-	4529139..4529918 (-)	780	WP_003204300.1	ABC transporter permease	-
QMK48_RS19940 (QMK48_19930)	-	4529921..4530853 (-)	933	WP_214509705.1	ABC transporter ATP-binding protein	-
QMK48_RS19945 (QMK48_19935)	-	4530990..4531613 (-)	624	WP_320389267.1	glutathione S-transferase	-
QMK48_RS19950 (QMK48_19940)	-	4531658..4532317 (-)	660	WP_253476880.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81082.21 Da
• Isoelectric Point: 9.5355

>NTDB_id=831510 QMK48_RS19925 WP_320389266.1 4526139..4528385(-) (comA) [Pseudomonas sp. P9_32]
MRTGLVALALGLLAPIFLPALPPLWLIAAMPVLALMALPFRSYPLGFFLFGLTWACLSAQFALDDRLPIALDGETRWVEG
RVVGLPQQGEGVVRFELADVHSRRSRLPTAMRLAWFGGPPVNSGERWRLAVKLKRPSGLLNPHGFDYAAWLLSRGIGATG
TIKDGHLLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPVGLAWLPWACGLAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPVPFMGEGLLWIAGGLLDLLFKGLTLVAGRMPAWVPAAVPPWALGIAAFGAFLLLLPKGVPLRVLGWPMVLLMV
FPPQEHLPQGHAEIWQLDVGQGLAVLVRTRRHALLYDAGPRFGEADAGERVVLPTLRKLGVRGLDLMLLSHADADHAGGA
RAVRNGLPTMEVISGDPDALPAELLAGPCDSGRRWEWDGVRFELWRWASAVESNQKSCVLLVEAGGERLLLTGDIDTPAE
RALLDEALAVPIQWLAAPHHGSRSSSSMALLSRLQPHSVLISRGQGNAFGHPHPQVMARYRRSGLAVYDSAEQGAIRLQL
GAFELPRTEAGHRRYWRDPPAVGPAGQY

Nucleotide

• Length: 2247 bp

>NTDB_id=831510 QMK48_RS19925 WP_320389266.1 4526139..4528385(-) (comA) [Pseudomonas sp. P9_32]
ATGCGCACAGGGTTAGTCGCGCTTGCACTGGGGCTGTTGGCCCCGATTTTTTTGCCGGCACTGCCGCCGTTGTGGCTGAT
TGCAGCCATGCCGGTGCTGGCGCTGATGGCGTTGCCGTTTCGAAGCTACCCTCTGGGTTTTTTCCTGTTCGGGCTGACCT
GGGCCTGCCTGTCGGCGCAGTTTGCGCTGGACGACCGGTTACCCATCGCGCTTGACGGCGAAACCCGCTGGGTCGAGGGG
CGAGTGGTCGGTTTGCCGCAACAGGGCGAAGGCGTGGTGCGCTTCGAACTGGCCGATGTCCATTCACGCCGTAGCCGTCT
ACCGACGGCGATGCGCCTCGCCTGGTTCGGTGGGCCGCCGGTCAACAGCGGCGAACGATGGCGATTGGCGGTGAAGCTCA
AGCGGCCCAGCGGGCTGCTGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGTTGAGCCGCGGCATCGGCGCGACCGGT
ACGATCAAAGATGGCCATCTCCTGCAAGCGGCCCGGGGGGCCTGGCGCGATGAGGTGCGCCAGGCCCTGGCACAGGTCGA
TGCCCATGGCCGCTCCGGTGCGCTGGCGGCGCTGGTCCTGGGCGACGGCGGCGGGTTGAGTCGCGAGGATTGGCAGGTGC
TGCAAGACACCGGCACCGTCCACTTGCTGGTGATCTCTGGGCAACACATCGGCCTGCTTGCCGGCCTGGTGTACTTGTTG
GTGGCCGGTGCGGCGCGTTATGGCCTGTGGCCGGTGGGTCTGGCCTGGTTGCCTTGGGCCTGTGGGCTGGCCTTCTGTGC
CGCCCTGGGCTACGGCTTGCTCGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGCGCGATGATCGGCCTGGTGTTGCTGT
GGCGCTTGCGTTTCAAACAGCCAGATCCGTGGTGGGCATGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTT
GCCAGCTTGCGGCCGGGGTTCTGGTTGTCGTTTGCAGCCGTGGCCATCTTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTTGCGCTTGGCCTGTGTCCGTTGTTGTTGATCGTGGGCT
TGCCGGTCAGCCTCAGCGGGCCGTTGGTGAACTTGCTGGCGGTGCCCTGGATCAGCCTGTTGGTATTGCCGCCAGCGCTG
CTTGGCACGGCGTTGTTGCCGGTGCCGTTCATGGGCGAAGGCCTGTTGTGGATCGCCGGCGGGCTGCTCGATCTGCTGTT
CAAGGGGCTGACGCTGGTTGCCGGACGAATGCCGGCGTGGGTTCCTGCCGCAGTCCCGCCCTGGGCCTTGGGTATCGCCG
CCTTCGGTGCTTTTTTGCTGCTGTTGCCCAAAGGTGTGCCGCTACGTGTACTGGGGTGGCCGATGGTGTTGCTGATGGTT
TTTCCACCGCAAGAACACCTGCCGCAAGGGCACGCCGAGATCTGGCAGTTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGGACCCGGCGGCACGCCCTGCTTTACGACGCCGGGCCGCGCTTTGGCGAGGCTGACGCGGGCGAGCGGGTCGTACTGC
CGACCTTGCGCAAACTGGGTGTGCGCGGCTTGGACCTGATGTTGCTAAGCCATGCCGACGCCGATCACGCTGGCGGTGCC
CGCGCCGTGCGCAATGGGCTGCCGACGATGGAGGTGATCAGCGGCGATCCCGACGCGCTGCCCGCCGAGCTGCTGGCCGG
GCCTTGCGACAGTGGCAGACGCTGGGAATGGGACGGGGTCAGGTTCGAGCTGTGGCGGTGGGCCTCTGCTGTCGAGAGCA
ACCAGAAGTCCTGCGTCTTGCTGGTGGAGGCCGGCGGTGAACGCCTGCTCCTGACCGGCGATATCGACACCCCGGCCGAG
CGCGCCTTGCTCGACGAGGCCCTGGCGGTGCCGATCCAGTGGCTGGCCGCGCCGCATCACGGCAGCCGCAGTTCGTCGTC
GATGGCGTTGCTGTCGCGTCTCCAGCCGCATTCGGTATTGATCTCCCGAGGGCAGGGCAACGCGTTCGGCCACCCACATC
CCCAGGTGATGGCTCGGTATCGACGCTCGGGCCTGGCGGTCTACGACAGCGCCGAGCAGGGCGCCATTCGTCTGCAACTG
GGCGCTTTCGAACTGCCGCGCACCGAGGCCGGGCATCGCCGCTACTGGCGTGATCCGCCAGCCGTCGGGCCAGCGGGGCA
ATATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-165)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.592	95.722	0.59
comA	Ralstonia pseudosolanacearum GMI1000	32.113	100	0.364