Detailed information NTG0831484

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: QMK47_RS20825
• Genome accession: NZ_CP125373
• Coordinates: 4735101..4737347 (-)
• Length: 748 a.a.
• NCBI ID: WP_320389266.1
• Uniprot ID: -
• Organism: Pseudomonas sp. P9_35
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4730101..4742347

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK47_RS20790 (QMK47_20780)	murB	4730485..4731504 (-)	1020	WP_320389265.1	UDP-N-acetylmuramate dehydrogenase	-
QMK47_RS20795 (QMK47_20785)	-	4731501..4731965 (-)	465	WP_014339516.1	low molecular weight protein-tyrosine-phosphatase	-
QMK47_RS20800 (QMK47_20790)	kdsB	4731965..4732729 (-)	765	WP_053189634.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QMK47_RS20805 (QMK47_20795)	-	4732726..4732911 (-)	186	WP_003174668.1	Trm112 family protein	-
QMK47_RS20810 (QMK47_20800)	lpxK	4732935..4733945 (-)	1011	WP_258689035.1	tetraacyldisaccharide 4'-kinase	-
QMK47_RS20815 (QMK47_20805)	-	4733945..4734373 (-)	429	WP_214509707.1	ExbD/TolR family protein	-
QMK47_RS20820 (QMK47_20810)	exbB	4734370..4735005 (-)	636	WP_170845976.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
QMK47_RS20825 (QMK47_20815)	comA	4735101..4737347 (-)	2247	WP_320389266.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QMK47_RS20830 (QMK47_20820)	-	4737492..4738007 (+)	516	WP_003204298.1	DUF2062 domain-containing protein	-
QMK47_RS20835 (QMK47_20825)	-	4738101..4738880 (-)	780	WP_003204300.1	ABC transporter permease	-
QMK47_RS20840 (QMK47_20830)	-	4738883..4739815 (-)	933	WP_214509705.1	ABC transporter ATP-binding protein	-
QMK47_RS20845 (QMK47_20835)	-	4739952..4740575 (-)	624	WP_320389267.1	glutathione S-transferase	-
QMK47_RS20850 (QMK47_20840)	-	4740620..4741279 (-)	660	WP_253476880.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81082.21 Da
• Isoelectric Point: 9.5355

>NTDB_id=831484 QMK47_RS20825 WP_320389266.1 4735101..4737347(-) (comA) [Pseudomonas sp. P9_35]
MRTGLVALALGLLAPIFLPALPPLWLIAAMPVLALMALPFRSYPLGFFLFGLTWACLSAQFALDDRLPIALDGETRWVEG
RVVGLPQQGEGVVRFELADVHSRRSRLPTAMRLAWFGGPPVNSGERWRLAVKLKRPSGLLNPHGFDYAAWLLSRGIGATG
TIKDGHLLQAARGAWRDEVRQALAQVDAHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPVGLAWLPWACGLAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPVPFMGEGLLWIAGGLLDLLFKGLTLVAGRMPAWVPAAVPPWALGIAAFGAFLLLLPKGVPLRVLGWPMVLLMV
FPPQEHLPQGHAEIWQLDVGQGLAVLVRTRRHALLYDAGPRFGEADAGERVVLPTLRKLGVRGLDLMLLSHADADHAGGA
RAVRNGLPTMEVISGDPDALPAELLAGPCDSGRRWEWDGVRFELWRWASAVESNQKSCVLLVEAGGERLLLTGDIDTPAE
RALLDEALAVPIQWLAAPHHGSRSSSSMALLSRLQPHSVLISRGQGNAFGHPHPQVMARYRRSGLAVYDSAEQGAIRLQL
GAFELPRTEAGHRRYWRDPPAVGPAGQY

Nucleotide

• Length: 2247 bp

>NTDB_id=831484 QMK47_RS20825 WP_320389266.1 4735101..4737347(-) (comA) [Pseudomonas sp. P9_35]
ATGCGCACAGGGTTAGTCGCGCTTGCACTGGGGCTGTTGGCCCCGATTTTTTTGCCGGCACTGCCGCCGTTGTGGCTGAT
TGCAGCCATGCCGGTGCTGGCGCTGATGGCGTTGCCGTTTCGAAGCTACCCTCTGGGTTTTTTCCTGTTCGGGCTGACCT
GGGCCTGCCTGTCGGCGCAGTTTGCGCTGGACGACCGGTTACCCATCGCGCTTGACGGCGAAACCCGCTGGGTCGAGGGG
CGAGTGGTCGGTTTGCCGCAACAGGGCGAAGGCGTGGTGCGCTTCGAACTGGCCGATGTCCATTCACGCCGTAGCCGTCT
ACCGACGGCGATGCGCCTCGCCTGGTTCGGTGGGCCGCCGGTCAACAGCGGCGAACGATGGCGATTGGCGGTGAAGCTCA
AGCGGCCCAGCGGGCTGCTGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGTTGAGCCGCGGCATCGGCGCGACCGGT
ACGATCAAAGATGGCCATCTCCTGCAAGCGGCCCGGGGGGCCTGGCGCGATGAGGTGCGCCAGGCCCTGGCACAGGTCGA
TGCCCATGGCCGCTCCGGTGCGCTGGCGGCGCTGGTCCTGGGCGACGGCGGCGGGTTGAGTCGCGAGGATTGGCAGGTGC
TGCAAGACACCGGCACCGTCCACTTGCTGGTGATCTCTGGGCAACACATCGGCCTGCTTGCCGGCCTGGTGTACTTGTTG
GTGGCCGGTGCGGCGCGTTATGGCCTGTGGCCGGTGGGTCTGGCCTGGTTGCCTTGGGCCTGTGGGCTGGCCTTCTGTGC
CGCCCTGGGCTACGGCTTGCTCGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGCGCGATGATCGGCCTGGTGTTGCTGT
GGCGCTTGCGTTTCAAACAGCCAGATCCGTGGTGGGCATGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTT
GCCAGCTTGCGGCCGGGGTTCTGGTTGTCGTTTGCAGCCGTGGCCATCTTGATGTTCACCTTTGGCGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTTGCGCTTGGCCTGTGTCCGTTGTTGTTGATCGTGGGCT
TGCCGGTCAGCCTCAGCGGGCCGTTGGTGAACTTGCTGGCGGTGCCCTGGATCAGCCTGTTGGTATTGCCGCCAGCGCTG
CTTGGCACGGCGTTGTTGCCGGTGCCGTTCATGGGCGAAGGCCTGTTGTGGATCGCCGGCGGGCTGCTCGATCTGCTGTT
CAAGGGGCTGACGCTGGTTGCCGGACGAATGCCGGCGTGGGTTCCTGCCGCAGTCCCGCCCTGGGCCTTGGGTATCGCCG
CCTTCGGTGCTTTTTTGCTGCTGTTGCCCAAAGGTGTGCCGCTACGTGTACTGGGGTGGCCGATGGTGTTGCTGATGGTT
TTTCCACCGCAAGAACACCTGCCGCAAGGGCACGCCGAGATCTGGCAGTTGGACGTGGGCCAAGGGCTGGCGGTGCTGGT
GCGGACCCGGCGGCACGCCCTGCTTTACGACGCCGGGCCGCGCTTTGGCGAGGCTGACGCGGGCGAGCGGGTCGTACTGC
CGACCTTGCGCAAACTGGGTGTGCGCGGCTTGGACCTGATGTTGCTAAGCCATGCCGACGCCGATCACGCTGGCGGTGCC
CGCGCCGTGCGCAATGGGCTGCCGACGATGGAGGTGATCAGCGGCGATCCCGACGCGCTGCCCGCCGAGCTGCTGGCCGG
GCCTTGCGACAGTGGCAGACGCTGGGAATGGGACGGGGTCAGGTTCGAGCTGTGGCGGTGGGCCTCTGCTGTCGAGAGCA
ACCAGAAGTCCTGCGTCTTGCTGGTGGAGGCCGGCGGTGAACGCCTGCTCCTGACCGGCGATATCGACACCCCGGCCGAG
CGCGCCTTGCTCGACGAGGCCCTGGCGGTGCCGATCCAGTGGCTGGCCGCGCCGCATCACGGCAGCCGCAGTTCGTCGTC
GATGGCGTTGCTGTCGCGTCTCCAGCCGCATTCGGTATTGATCTCCCGAGGGCAGGGCAACGCGTTCGGCCACCCACATC
CCCAGGTGATGGCTCGGTATCGACGCTCGGGCCTGGCGGTCTACGACAGCGCCGAGCAGGGCGCCATTCGTCTGCAACTG
GGCGCTTTCGAACTGCCGCGCACCGAGGCCGGGCATCGCCGCTACTGGCGTGATCCGCCAGCCGTCGGGCCAGCGGGGCA
ATATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-165)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.592	95.722	0.59
comA	Ralstonia pseudosolanacearum GMI1000	32.113	100	0.364