Detailed information NTG0831337

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: HX0037_RS01720
• Genome accession: NZ_CP139782
• Coordinates: 459135..460157 (-)
• Length: 340 a.a.
• NCBI ID: WP_094246960.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HX0037
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 454135..465157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HX0037_RS01690	-	454640..455521 (-)	882	WP_032868805.1	2-dehydropantoate 2-reductase	-
HX0037_RS01695	-	455684..456166 (+)	483	WP_003154449.1	N-acetyltransferase	-
HX0037_RS01700	gerR	456207..456782 (-)	576	WP_003154450.1	sporulation-specific transcriptional regulator GerR	-
HX0037_RS01705	rpmF	456941..457120 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
HX0037_RS01710	-	457142..457660 (-)	519	WP_003154459.1	YceD family protein	-
HX0037_RS01715	-	457869..459116 (+)	1248	WP_096034933.1	nucleotidyltransferase	-
HX0037_RS01720	sepM	459135..460157 (-)	1023	WP_094246960.1	SepM family pheromone-processing serine protease	Regulator
HX0037_RS01725	-	460163..460942 (-)	780	WP_014304961.1	patatin family protein	-
HX0037_RS01730	ylbJ	461122..462348 (+)	1227	WP_003154466.1	sporulation integral membrane protein YlbJ	-
HX0037_RS01735	coaD	462367..462849 (-)	483	WP_003154467.1	pantetheine-phosphate adenylyltransferase	-
HX0037_RS01740	rsmD	462854..463408 (-)	555	WP_077722171.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HX0037_RS01745	-	463408..463617 (-)	210	WP_094246961.1	hypothetical protein	-
HX0037_RS01750	-	463708..463980 (-)	273	WP_003154470.1	YlbG family protein	-
HX0037_RS01755	ylbF	464039..464488 (-)	450	WP_003154472.1	YlbF family regulator	Regulator
HX0037_RS01760	-	464559..464798 (-)	240	WP_003154475.1	YlbE-like family protein	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37433.00 Da
• Isoelectric Point: 7.3848

>NTDB_id=831337 HX0037_RS01720 WP_094246960.1 459135..460157(-) (sepM) [Bacillus amyloliquefaciens strain HX0037]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHVERDTKEKTVDIVLKSFPEDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PIDTMQDALDYLDQLKVKST

Nucleotide

• Length: 1023 bp

>NTDB_id=831337 HX0037_RS01720 WP_094246960.1 459135..460157(-) (sepM) [Bacillus amyloliquefaciens strain HX0037]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATATGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACGTTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGAAGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGACC
GGAACGTGAAAGTAAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTATCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Peptidase family M50 (Peptidase_M50) (100-219)

• PDZ domain (PDZ_2) (128-193)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (231-330)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	38.663	100	0.391