Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   HX0037_RS00970 Genome accession   NZ_CP139782
Coordinates   307573..308841 (-) Length   422 a.a.
NCBI ID   WP_007611459.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain HX0037     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 302573..313841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HX0037_RS00965 proS 305847..307541 (-) 1695 WP_003154202.1 proline--tRNA ligase -
  HX0037_RS00970 eeP 307573..308841 (-) 1269 WP_007611459.1 RIP metalloprotease RseP Regulator
  HX0037_RS00975 dxr 308848..309999 (-) 1152 WP_070081828.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  HX0037_RS00980 - 310055..310852 (-) 798 WP_094246932.1 phosphatidate cytidylyltransferase -
  HX0037_RS00985 - 310856..311638 (-) 783 WP_003154211.1 isoprenyl transferase -
  HX0037_RS00990 frr 311764..312321 (-) 558 WP_003154212.1 ribosome recycling factor -
  HX0037_RS00995 pyrH 312324..313046 (-) 723 WP_003154213.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46540.43 Da        Isoelectric Point: 6.5185

>NTDB_id=831328 HX0037_RS00970 WP_007611459.1 307573..308841(-) (eeP) [Bacillus amyloliquefaciens strain HX0037]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=831328 HX0037_RS00970 WP_007611459.1 307573..308841(-) (eeP) [Bacillus amyloliquefaciens strain HX0037]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGGGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATTGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCAGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCTTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATCCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGCCCTGTCGGCATTTATGATATGACCGATCAAGTTGCAAAAACCGGTATTAT
CAACTTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4