Detailed information NTG0831295

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: OPT59_RS09815
• Genome accession: NZ_CP125360
• Coordinates: 1972801..1973733 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain UT_120444
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1967801..1978733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OPT59_RS09790 (OPT59_09790)	tsaD	1968291..1969307 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
OPT59_RS09795 (OPT59_09795)	rimI	1969297..1969722 (-)	426	WP_042357994.1	ribosomal protein S18-alanine N-acetyltransferase	-
OPT59_RS09800 (OPT59_09800)	tsaB	1969724..1970422 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
OPT59_RS09805 (OPT59_09805)	-	1970708..1970938 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
OPT59_RS09810 (OPT59_09810)	rnjA	1970940..1972622 (+)	1683	WP_003056700.1	ribonuclease J1	-
OPT59_RS09815 (OPT59_09815)	amiF	1972801..1973733 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
OPT59_RS09820 (OPT59_09820)	oppD	1973726..1974778 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
OPT59_RS09825 (OPT59_09825)	-	1974790..1975821 (-)	1032	WP_138084043.1	ABC transporter permease	-
OPT59_RS09830 (OPT59_09830)	-	1975831..1976745 (-)	915	WP_003052794.1	ABC transporter permease	-
OPT59_RS09835 (OPT59_09835)	-	1977013..1978668 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=831295 OPT59_RS09815 WP_003060110.1 1972801..1973733(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=831295 OPT59_RS09815 WP_003060110.1 1972801..1973733(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGACCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526