Detailed information NTG0083112

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8623_RS10815
• Genome accession: NZ_AP026928
• Coordinates: 2082605..2083702 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266662.1
• Uniprot ID: Q8DMX3
• Organism: Streptococcus pneumoniae strain PZ900700406
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2077605..2088702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8623_RS10790 (PC0401_20680)	pgsA	2078126..2078671 (-)	546	WP_000712136.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8623_RS10795 (PC0401_20690)	rodZ	2078682..2079503 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8623_RS10800 (PC0401_20700)	yfmH	2079545..2080828 (-)	1284	WP_317649662.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8623_RS10805 (PC0401_20710)	yfmF	2080825..2082075 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8623_RS10810 (PC0401_20720)	yaaA	2082234..2082602 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8623_RS10815 (PC0401_20730)	recF	2082605..2083702 (+)	1098	WP_000266662.1	DNA replication/repair protein RecF	Machinery gene
R8623_RS10820 (PC0401_20740)	guaB	2083753..2085231 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8623_RS10825 (PC0401_20750)	trpS	2085383..2086408 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8623_RS10830 (PC0401_20760)	-	2086614..2088236 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41916.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=83112 R8623_RS10815 WP_000266662.1 2082605..2083702(+) (recF) [Streptococcus pneumoniae strain PZ900700406]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=83112 R8623_RS10815 WP_000266662.1 2082605..2083702(+) (recF) [Streptococcus pneumoniae strain PZ900700406]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q8DMX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	100	100	1
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46