Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QJQ50_RS07075 Genome accession   NZ_CP125315
Coordinates   1495001..1496242 (-) Length   413 a.a.
NCBI ID   WP_005689610.1    Uniprot ID   A0A0E3CQJ6
Organism   Lacticaseibacillus rhamnosus strain k32     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490001..1501242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJQ50_RS07070 (QJQ50_07070) - 1493247..1494977 (-) 1731 WP_005711690.1 proline--tRNA ligase -
  QJQ50_RS07075 (QJQ50_07075) eeP 1495001..1496242 (-) 1242 WP_005689610.1 RIP metalloprotease RseP Regulator
  QJQ50_RS07080 (QJQ50_07080) - 1496259..1497047 (-) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  QJQ50_RS07085 (QJQ50_07085) - 1497083..1497835 (-) 753 WP_005689614.1 isoprenyl transferase -
  QJQ50_RS07090 (QJQ50_07090) frr 1498333..1498890 (-) 558 WP_005684323.1 ribosome recycling factor -
  QJQ50_RS07095 (QJQ50_07095) pyrH 1498890..1499609 (-) 720 WP_005684324.1 UMP kinase -
  QJQ50_RS07100 (QJQ50_07100) tsf 1500102..1500983 (-) 882 WP_032963634.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45280.89 Da        Isoelectric Point: 8.0452

>NTDB_id=831075 QJQ50_RS07075 WP_005689610.1 1495001..1496242(-) (eeP) [Lacticaseibacillus rhamnosus strain k32]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGKVTRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEALIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=831075 QJQ50_RS07075 WP_005689610.1 1495001..1496242(-) (eeP) [Lacticaseibacillus rhamnosus strain k32]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGCAGCGGAATTTTAGTGCGTGAGTTTTCGATTGGCATGGGGCCTAAGCTATGGGCGTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGTATGGCTGGCTGGCAGGATGAGGAAGATGAAATCAAGCCTGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTAAAGTGACGCGGATTAATGCCAGTGATAAAACAACGCTGGCAGGTGG
TATGCCGGTACAAGTAAGCCGCGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAAGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAATGCCCCGGTTTGGCGGCGTCTAATTGTTAACTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGGTTGATGTTTGGCGTGCAGGTCTTAAACACCAATCAAATCGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCCGGGCTTAAGTCAAATGCCACAATTCAGGCGATTGATGGTGAAAAGATTCATTCTTTTACTGATCTT
TCCAGCAAAGTCAGCAAACAGGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTCAT
CAAGCCTAACAAGGATGGCAAGATCGGTGTGGAAGCACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTGACTGGCGGCTTTTCGCTTAATAAGTTA
GCCGGGCCGGTCGGGATTTATACCATGACCAGTCAAAGTGCTAAAGGCGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGTCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTTTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCGTTGAAGCCTGAAACAGAAGGTGTTGTCACCATGGTTGGCCTCGGGTTGATGGTGCTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501