Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   QL281_RS18795 Genome accession   NZ_CP125292
Coordinates   3530153..3531304 (+) Length   383 a.a.
NCBI ID   WP_041056516.1    Uniprot ID   A0AAQ3EUI1
Organism   Bacillus subtilis strain SRCM117797     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3525153..3536304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS18760 (QL281_18760) yjbB 3525612..3526829 (+) 1218 WP_080316915.1 MFS transporter -
  QL281_RS18765 (QL281_18765) yjbC 3526994..3527572 (+) 579 WP_144459369.1 GNAT family N-acetyltransferase -
  QL281_RS18770 (QL281_18770) spx 3527753..3528148 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  QL281_RS18775 (QL281_18775) yjbE 3528403..3529059 (-) 657 WP_003232944.1 TerC family protein -
  QL281_RS18780 (QL281_18780) - 3529229..3529369 (+) 141 WP_119122854.1 hypothetical protein -
  QL281_RS18785 (QL281_18785) mecA 3529336..3529992 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  QL281_RS18790 (QL281_18790) - 3529987..3530109 (-) 123 WP_003245684.1 hypothetical protein -
  QL281_RS18795 (QL281_18795) coiA 3530153..3531304 (+) 1152 WP_041056516.1 competence protein CoiA Machinery gene
  QL281_RS18800 (QL281_18800) pepF 3531534..3533363 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  QL281_RS18805 (QL281_18805) - 3533400..3533567 (-) 168 WP_003244944.1 hypothetical protein -
  QL281_RS18810 (QL281_18810) spxH 3533882..3534781 (-) 900 WP_041336637.1 protease adaptor protein SpxH -
  QL281_RS18815 (QL281_18815) yjbI 3534778..3535176 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  QL281_RS18820 (QL281_18820) cwlQ 3535431..3536165 (-) 735 WP_041336639.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44872.02 Da        Isoelectric Point: 9.9417

>NTDB_id=830935 QL281_RS18795 WP_041056516.1 3530153..3531304(+) (coiA) [Bacillus subtilis strain SRCM117797]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=830935 QL281_RS18795 WP_041056516.1 3530153..3531304(+) (coiA) [Bacillus subtilis strain SRCM117797]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTTA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961