Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   QL281_RS14690 Genome accession   NZ_CP125292
Coordinates   2738785..2739933 (+) Length   382 a.a.
NCBI ID   WP_017696151.1    Uniprot ID   A0AAP2M3C2
Organism   Bacillus subtilis strain SRCM117797     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2733785..2744933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS14670 (QL281_14670) yclH 2734155..2734835 (-) 681 WP_041336859.1 ABC transporter ATP-binding protein -
  QL281_RS14675 (QL281_14675) yclI 2734851..2736317 (-) 1467 WP_041336857.1 ABC transporter permease -
  QL281_RS14680 (QL281_14680) yclJ 2736530..2737213 (+) 684 WP_003246532.1 two-component system response regulator YclJ -
  QL281_RS14685 (QL281_14685) yclK 2737200..2738621 (+) 1422 WP_072557076.1 two-component system sensor histidine kinase YclK -
  QL281_RS14690 (QL281_14690) rapC 2738785..2739933 (+) 1149 WP_017696151.1 response regulator aspartate phosphatase RapC Regulator
  QL281_RS14695 (QL281_14695) phrC 2739917..2740039 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  QL281_RS14700 (QL281_14700) yczM 2740139..2740228 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  QL281_RS14705 (QL281_14705) yczN 2740310..2740423 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  QL281_RS14710 (QL281_14710) thrD 2740577..2741941 (-) 1365 WP_033883679.1 aspartate kinase -
  QL281_RS14715 (QL281_14715) ceuB 2742326..2743276 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  QL281_RS14720 (QL281_14720) yclO 2743269..2744216 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -

Sequence

Protein


Download         Length: 382 a.a.        Molecular weight: 45649.69 Da        Isoelectric Point: 5.0423

>NTDB_id=830919 QL281_RS14690 WP_017696151.1 2738785..2739933(+) (rapC) [Bacillus subtilis strain SRCM117797]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKRGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=830919 QL281_RS14690 WP_017696151.1 2738785..2739933(+) (rapC) [Bacillus subtilis strain SRCM117797]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAATTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACTTTTGAAAGCAGCAGGATCGTCAATTCACTGCCGCAAGCATACTT
TTTAATTACCTTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACCTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-66)

Tetratricopeptide repeat (TPR_12)

(223-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

99.215

100

0.992
  rapF Bacillus subtilis subsp. subtilis str. 168

57.105

99.476

0.568