Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QL281_RS06930 Genome accession   NZ_CP125292
Coordinates   1256747..1259059 (-) Length   770 a.a.
NCBI ID   WP_041332996.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117797     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1251747..1264059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS06890 (QL281_06890) mrpB 1252214..1252645 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  QL281_RS06895 (QL281_06895) mrpC 1252645..1252986 (+) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  QL281_RS06900 (QL281_06900) mrpD 1252979..1254460 (+) 1482 WP_144458973.1 Na+/H+ antiporter subunit D -
  QL281_RS06905 (QL281_06905) mrpE 1254466..1254942 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QL281_RS06910 (QL281_06910) mrpF 1254942..1255226 (+) 285 WP_041052851.1 Na(+)/H(+) antiporter subunit F1 -
  QL281_RS06915 (QL281_06915) mnhG 1255210..1255584 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QL281_RS06920 (QL281_06920) yuxO 1255623..1256003 (-) 381 WP_041052848.1 hotdog fold thioesterase -
  QL281_RS06925 (QL281_06925) comA 1256022..1256666 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QL281_RS06930 (QL281_06930) comP 1256747..1259059 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  QL281_RS06935 (QL281_06935) comX 1259075..1259296 (-) 222 WP_014480704.1 competence pheromone ComX -
  QL281_RS06940 (QL281_06940) - 1259298..1260161 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  QL281_RS06945 (QL281_06945) degQ 1260346..1260486 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QL281_RS06950 (QL281_06950) - 1260708..1260833 (+) 126 WP_003228793.1 hypothetical protein -
  QL281_RS06955 (QL281_06955) - 1260947..1261315 (+) 369 WP_014477834.1 hypothetical protein -
  QL281_RS06960 (QL281_06960) pdeH 1261291..1262520 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89706.94 Da        Isoelectric Point: 8.2535

>NTDB_id=830896 QL281_RS06930 WP_041332996.1 1256747..1259059(-) (comP) [Bacillus subtilis strain SRCM117797]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSCVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=830896 QL281_RS06930 WP_041332996.1 1256747..1259059(-) (comP) [Bacillus subtilis strain SRCM117797]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCATGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.047

99.87

0.56