Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   QL281_RS06925 Genome accession   NZ_CP125292
Coordinates   1256022..1256666 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117797     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1251022..1261666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL281_RS06890 (QL281_06890) mrpB 1252214..1252645 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  QL281_RS06895 (QL281_06895) mrpC 1252645..1252986 (+) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  QL281_RS06900 (QL281_06900) mrpD 1252979..1254460 (+) 1482 WP_144458973.1 Na+/H+ antiporter subunit D -
  QL281_RS06905 (QL281_06905) mrpE 1254466..1254942 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QL281_RS06910 (QL281_06910) mrpF 1254942..1255226 (+) 285 WP_041052851.1 Na(+)/H(+) antiporter subunit F1 -
  QL281_RS06915 (QL281_06915) mnhG 1255210..1255584 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QL281_RS06920 (QL281_06920) yuxO 1255623..1256003 (-) 381 WP_041052848.1 hotdog fold thioesterase -
  QL281_RS06925 (QL281_06925) comA 1256022..1256666 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QL281_RS06930 (QL281_06930) comP 1256747..1259059 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  QL281_RS06935 (QL281_06935) comX 1259075..1259296 (-) 222 WP_014480704.1 competence pheromone ComX -
  QL281_RS06940 (QL281_06940) - 1259298..1260161 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  QL281_RS06945 (QL281_06945) degQ 1260346..1260486 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QL281_RS06950 (QL281_06950) - 1260708..1260833 (+) 126 WP_003228793.1 hypothetical protein -
  QL281_RS06955 (QL281_06955) - 1260947..1261315 (+) 369 WP_014477834.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=830895 QL281_RS06925 WP_003220716.1 1256022..1256666(-) (comA) [Bacillus subtilis strain SRCM117797]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=830895 QL281_RS06925 WP_003220716.1 1256022..1256666(-) (comA) [Bacillus subtilis strain SRCM117797]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAAGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTTAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1