Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H7680_RS08345 Genome accession   NZ_AP023394
Coordinates   1698726..1699451 (-) Length   241 a.a.
NCBI ID   WP_014612539.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 159     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1693726..1704451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7680_RS08315 (SDSE159_16220) nusA 1693921..1695078 (-) 1158 WP_003057051.1 transcription termination factor NusA -
  H7680_RS08320 (SDSE159_16230) rimP 1695221..1695715 (-) 495 WP_044022604.1 ribosome maturation factor RimP -
  H7680_RS08330 (SDSE159_16240) trmB 1696198..1696833 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7680_RS08335 (SDSE159_16250) - 1696833..1697624 (-) 792 WP_003052472.1 phosphotransferase family protein -
  H7680_RS08340 (SDSE159_16260) - 1697689..1698723 (-) 1035 WP_003062324.1 ABC transporter permease -
  H7680_RS08345 (SDSE159_16270) pptA 1698726..1699451 (-) 726 WP_014612539.1 ABC transporter ATP-binding protein Regulator
  H7680_RS08350 (SDSE159_16280) - 1699523..1699942 (+) 420 WP_012767493.1 HIT family protein -
  H7680_RS08355 (SDSE159_16290) - 1699939..1700268 (+) 330 WP_003057072.1 hypothetical protein -
  H7680_RS08360 (SDSE159_16300) - 1700426..1701694 (-) 1269 WP_015058007.1 LCP family protein -
  H7680_RS08365 (SDSE159_16310) - 1701706..1702227 (-) 522 WP_003057063.1 GNAT family N-acetyltransferase -
  H7680_RS08370 (SDSE159_16320) tsaE 1702220..1702663 (-) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H7680_RS08375 (SDSE159_16330) - 1702840..1704300 (-) 1461 WP_012767496.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26515.78 Da        Isoelectric Point: 4.6450

>NTDB_id=83076 H7680_RS08345 WP_014612539.1 1698726..1699451(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEIWIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=83076 H7680_RS08345 WP_014612539.1 1698726..1699451(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATTTGGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTTGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739

Multiple sequence alignment