Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QLX56_RS05360 Genome accession   NZ_CP125281
Coordinates   1100106..1101374 (+) Length   422 a.a.
NCBI ID   WP_002338823.1    Uniprot ID   A0A4Y3JME5
Organism   Enterococcus faecium strain EF     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1095106..1106374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX56_RS05335 (QLX56_05335) tsf 1095841..1096722 (+) 882 WP_002293878.1 translation elongation factor Ts -
  QLX56_RS05340 (QLX56_05340) pyrH 1096859..1097581 (+) 723 WP_002293877.1 UMP kinase -
  QLX56_RS05345 (QLX56_05345) frr 1097584..1098141 (+) 558 WP_002293875.1 ribosome recycling factor -
  QLX56_RS05350 (QLX56_05350) - 1098336..1099148 (+) 813 WP_002400345.1 isoprenyl transferase -
  QLX56_RS05355 (QLX56_05355) - 1099145..1099945 (+) 801 WP_002400343.1 phosphatidate cytidylyltransferase -
  QLX56_RS05360 (QLX56_05360) eeP 1100106..1101374 (+) 1269 WP_002338823.1 RIP metalloprotease RseP Regulator
  QLX56_RS05365 (QLX56_05365) - 1101442..1103151 (+) 1710 WP_002314809.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46047.51 Da        Isoelectric Point: 4.8405

>NTDB_id=830548 QLX56_RS05360 WP_002338823.1 1100106..1101374(+) (eeP) [Enterococcus faecium strain EF]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHSWN
DLTTVITKNPGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGIQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=830548 QLX56_RS05360 WP_002338823.1 1100106..1101374(+) (eeP) [Enterococcus faecium strain EF]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAGATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCAATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGGGATGAAACAG
AAGTAGTGACCTATCCTGTTGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCGATGAATAACTTTATCTTGGCAAT
CGTGTTATTCATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGTGTGGACGGTAAAGAAATCCACTCTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCCAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGCATACAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGCGGACCTGTTATGATGTACCAATTGTCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTTGGAATCGTCAATTTGCTTCCGATCCCTGCCTTAGATGGTG
GAAAATTAGTCTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTGATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y3JME5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.972

100

0.547
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545