Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | R6Z04_RS08285 | Genome accession | NZ_CP139440 |
| Coordinates | 1572431..1573456 (+) | Length | 341 a.a. |
| NCBI ID | WP_003245451.1 | Uniprot ID | O34470 |
| Organism | Bacillus subtilis strain GUCC4 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1567431..1578456
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R6Z04_RS08250 (R6Z04_08250) | ylbE | 1567731..1567970 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| R6Z04_RS08255 (R6Z04_08255) | ylbF | 1568086..1568535 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| R6Z04_RS08260 (R6Z04_08260) | ylbG | 1568590..1568862 (+) | 273 | WP_009967171.1 | YlbG family protein | - |
| R6Z04_RS08265 (R6Z04_08265) | rsmD | 1569185..1569739 (+) | 555 | WP_003232227.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| R6Z04_RS08270 (R6Z04_08270) | coaD | 1569744..1570229 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| R6Z04_RS08275 (R6Z04_08275) | spoVV | 1570240..1571466 (-) | 1227 | WP_003245492.1 | dipicolinic acid transporter SpoVV | - |
| R6Z04_RS08280 (R6Z04_08280) | ylbK | 1571647..1572429 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| R6Z04_RS08285 (R6Z04_08285) | sepM | 1572431..1573456 (+) | 1026 | WP_003245451.1 | protease DdcP | Regulator |
| R6Z04_RS08290 (R6Z04_08290) | tmcAL | 1573473..1574720 (-) | 1248 | WP_003244707.1 | nucleotidyltransferase | - |
| R6Z04_RS08295 (R6Z04_08295) | - | 1574717..1574902 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| R6Z04_RS08300 (R6Z04_08300) | ylbN | 1574930..1575448 (+) | 519 | WP_003232214.1 | YceD family protein | - |
| R6Z04_RS08305 (R6Z04_08305) | rpmF | 1575470..1575649 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| R6Z04_RS08310 (R6Z04_08310) | gerR | 1575795..1576376 (+) | 582 | WP_003232210.1 | sporulation specific transcriptional regulator GerR | - |
| R6Z04_RS08315 (R6Z04_08315) | ylbP | 1576433..1576915 (-) | 483 | WP_003244940.1 | N-acetyltransferase | - |
| R6Z04_RS08320 (R6Z04_08320) | panEA | 1577075..1577971 (+) | 897 | WP_003232206.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37651.23 Da Isoelectric Point: 6.5347
>NTDB_id=830463 R6Z04_RS08285 WP_003245451.1 1572431..1573456(+) (sepM) [Bacillus subtilis strain GUCC4]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=830463 R6Z04_RS08285 WP_003245451.1 1572431..1573456(+) (sepM) [Bacillus subtilis strain GUCC4]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |