Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   OH685_RS17560 Genome accession   NZ_CP125227
Coordinates   3738870..3743375 (-) Length   1501 a.a.
NCBI ID   WP_282463535.1    Uniprot ID   -
Organism   Acinetobacter pittii strain SO1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3733870..3748375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS17530 (OH685_17720) elsL 3734830..3735333 (-) 504 WP_063099547.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  OH685_RS17535 (OH685_17725) - 3735485..3735853 (-) 369 WP_174725434.1 YbaN family protein -
  OH685_RS17540 (OH685_17730) - 3735957..3736838 (+) 882 WP_282463533.1 DUF1853 family protein -
  OH685_RS17545 (OH685_17735) - 3736962..3737105 (+) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  OH685_RS17550 (OH685_17740) dapE 3737232..3738368 (+) 1137 WP_151302300.1 succinyl-diaminopimelate desuccinylase -
  OH685_RS17555 (OH685_17745) - 3738403..3738870 (-) 468 WP_282463534.1 hypothetical protein -
  OH685_RS17560 (OH685_17750) chpA 3738870..3743375 (-) 4506 WP_282463535.1 hybrid sensor histidine kinase/response regulator Regulator
  OH685_RS17565 (OH685_17755) pilJ 3743523..3745601 (-) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  OH685_RS17570 (OH685_17760) pilI 3745644..3746180 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  OH685_RS17575 (OH685_17765) pilH 3746241..3746603 (-) 363 WP_002116220.1 response regulator -
  OH685_RS17580 (OH685_17770) pilG 3746626..3747009 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  OH685_RS17585 (OH685_17775) - 3747294..3747932 (+) 639 WP_017400247.1 hypothetical protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171223.38 Da        Isoelectric Point: 4.4059

>NTDB_id=830461 OH685_RS17560 WP_282463535.1 3738870..3743375(-) (chpA) [Acinetobacter pittii strain SO1]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKDHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTISTSEVAIETEQTLVETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNCLDSLATHCSTEQLEADLQKFNQIWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLEELKLYTQYIPNLNSESLETHQDVFESLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQQNFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIKKQLIASPGLIDFIRLVQDDLADRLQIVHEQHLDYAASHTIQALKN
AGQVFDSHIKEVQAESETYVIHEVNFVELPQEAINNTALSFSELASGSEQITESNNQFVEQTELQVLYADQGYTENLQEQ
DINSVVEQTFMEEAAELLETADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGAWE
QTQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALDRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINAEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSTQEFFEFENKHYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTHRHK
SLNEAIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=830461 OH685_RS17560 WP_282463535.1 3738870..3743375(-) (chpA) [Acinetobacter pittii strain SO1]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATA
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCTGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATTAATCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAGATCATACCTTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAACAAATGACTTAGAACCAGAATCTACAGAAGTTTTAACTATTTC
GACTTCAGAAGTTGCTATAGAAACTGAACAGACTCTTGTTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCACTCTGAAGAAATTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATTGTTTAG
ATTCATTGGCTACCCATTGTTCTACTGAGCAATTGGAAGCTGATCTACAAAAATTTAATCAGATTTGGGATGCTTATATG
GAGCAGCATGGTGAGCATTCAAGCCCGCTCATGCCGCCACATGGTTTAGTGTCTCAGCTGTTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAGTTAGATTTTGAGAAGGGTATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCGGATTATATTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCCTTAGCTGCGGGGCAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGAAGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCATTAGAAACTCATCAAGACGTTTTTGAATCATTGTTTAATGCT
GAAGTTGAACAAACAGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACTATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAACAGAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTAAAAAACAATTAATAGCTTCGCCTGGTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTTTGCAAATAGTACATGAACAGCATCTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAAAAT
GCAGGTCAAGTATTTGATTCTCATATTAAAGAAGTGCAAGCAGAATCTGAAACCTATGTTATACATGAAGTAAATTTTGT
AGAATTACCGCAAGAAGCGATAAATAATACAGCGTTAAGCTTCAGTGAGTTAGCTTCTGGTTCTGAGCAGATTACTGAAT
CTAATAATCAATTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGACCAAGGCTATACAGAAAATCTTCAAGAGCAA
GATATTAATTCTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCTGAACTATTAGAAACGGCCGATCATCTATTAAAACA
ATGGTTCGAGCAGCGTACTAACCGTAGTATCTTGCTTCAGCTACAAAGGGCTGTGCATAGCTTGAAAGGCGGTTCCCGTA
TGCTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCACTTCATCATTTCAGC
TCAAATATTTACGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCTATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATTCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTCGAACTG
ATCTATTCAGCACAGAACCTGTAATGAGTTTTGTACAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGCGTGGGAA
CAAACACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
CGAAAATTCAATTAACCGTTCACGAATTGAAATGGATTTAAGCCAATTTGGCCATACTCTTGCAGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGCCGAATGGAAGGTGAATTAGAAACTCAAATTATTGCAAAACACGGTATTGAAAAC
TCTCGGTATACGGAATTTGATCCTTTAGAGATGGATCAATATTCTTCATTAAACCAGTTGTCAAAATCTCTTGCCGAATC
TGCATCAGATTTAGTGGATTTTAAAAATACATTATCTGAAAAGATCAGAGATACAGAGGGGTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTCATGCGAACACGCTTAGTACCATTCTCTCGGTTGCTGCCTCGTTTACAACGA
ATTGTGAGGCAGACTTCTACTGCGTTAGATCGACCTGCAGAGCTTTTTGTTAATAATACTGAGGGTGAGCTAGATCGGAC
AATGTTAGAGCGCTTGGTCACACCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGTTTAGAAGACCGTGCGCAAC
GTGAACAAGCTCAAAAACCAGAAACTGGACGCATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTCGTTACATTT
AAGGATGATGGACAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCATTAATGTCTGGTTTGATTAACGCAGAACAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGCACAGCCGATCAAGTTACTCAGATTTCAGGTC
GTGGTGTAGGACTAGATGTAGTACAAAGTGATATTAAAGCCTTAGGTGGCCACGTGAGCGTCGACTCTGTCTATGGGCAG
GGCACTGTCTTTACCATACGTGTTCCAACTACGGTAGCTGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCATTGGCTCAAATTGATCGAATTGTACGGGTTTCACCAGCCTCATTAGAACAATATTTCGGAAGTACACAAG
AGTTCTTTGAATTTGAAAATAAGCACTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCCATTCCGCGTTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAAGCAAATAATGGACAAACTGTTGCATTATTAGTTGACCAACT
GATTGGCTCACGTGCGCAGATTGTAGTTAAACCAATCGGACAGCAATTCTCTAGTATTGGGGCGATTGCGGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATCCAATCTACTCACCGACATAAG
TCGCTCAATGAAGCTATCTATAGACAACGTGAGTCTGACGAACGCCGTCTCATCATGATTGTAGATGATTCGGTAACTGT
GCGTAAGGTAACGTCTCGATTACTTGAACGTCAGGGCTATGATGTAGTCACCGCTAAAGATGGGGTCGATGCAATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGCTGCTTGATATTGAAATGCCGCGCATGGATGGCTTTGAGGTTCTCAATCTT
GTTCGACATCATGATCTACATCAAGATATGCCAGTCATCATGATTACTTCAAGAACTGGCGAAAAACACCGTGAACGAGC
ATTTGCTTTAGGGGTTAATCAGTACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAACATTGATGCGTTATTCA
TGACATTTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.987

100

0.804