Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   H7678_RS10590 Genome accession   NZ_AP023393
Coordinates   2157600..2158376 (+) Length   258 a.a.
NCBI ID   WP_003054458.1    Uniprot ID   A0A9X5R320
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 89     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2152600..2163376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7678_RS10570 (SDSE89_20720) - 2154356..2155354 (+) 999 WP_184010329.1 IS30 family transposase -
  H7678_RS10580 (SDSE89_20730) rlmH 2155597..2156076 (-) 480 WP_003057960.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  H7678_RS10585 (SDSE89_20740) htrA 2156288..2157511 (+) 1224 WP_046177498.1 trypsin-like peptidase domain-containing protein Regulator
  H7678_RS10590 (SDSE89_20750) spo0J 2157600..2158376 (+) 777 WP_003054458.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29136.15 Da        Isoelectric Point: 10.3001

>NTDB_id=83030 H7678_RS10590 WP_003054458.1 2157600..2158376(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQL
LLPFANQEELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=83030 H7678_RS10590 WP_003054458.1 2157600..2158376(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTATGCTAATAGAATCAAAAATGAAGGGTT
AAGTGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCAGAAAAATAAAAATATTTTTATCA
CTTCTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTG
CTGTTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.198

99.612

0.57


Multiple sequence alignment