Detailed information NTG0083022

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: H7678_RS09330
• Genome accession: NZ_AP023393
• Coordinates: 1902992..1903924 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain 89
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1897992..1908924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7678_RS09305 (SDSE89_18140)	tsaD	1898482..1899498 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
H7678_RS09310 (SDSE89_18150)	rimI	1899488..1899913 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
H7678_RS09315 (SDSE89_18160)	tsaB	1899915..1900613 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
H7678_RS09320 (SDSE89_18170)	-	1900899..1901129 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
H7678_RS09325 (SDSE89_18180)	rnjA	1901131..1902813 (+)	1683	WP_003056700.1	ribonuclease J1	-
H7678_RS09330 (SDSE89_18190)	amiF	1902992..1903924 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
H7678_RS09335 (SDSE89_18200)	oppD	1903917..1904969 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
H7678_RS09340 (SDSE89_18210)	-	1904981..1906012 (-)	1032	WP_046177231.1	ABC transporter permease	-
H7678_RS09345 (SDSE89_18220)	-	1906022..1906936 (-)	915	WP_003052794.1	ABC transporter permease	-
H7678_RS09350 (SDSE89_18230)	-	1907204..1908859 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=83022 H7678_RS09330 WP_003060110.1 1902992..1903924(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=83022 H7678_RS09330 WP_003060110.1 1902992..1903924(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain 89]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTATC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTTTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526