Detailed information NTG0082967

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8611_RS09220
• Genome accession: NZ_AP026927
• Coordinates: 1809542..1810441 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904867.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700178
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1804542..1815441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8611_RS09195 (PC0174_18050)	rsmA	1804872..1805744 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
R8611_RS09200 (PC0174_18060)	-	1805875..1806183 (-)	309	WP_000333257.1	hypothetical protein	-
R8611_RS09205 (PC0174_18070)	-	1806176..1806817 (-)	642	WP_050137387.1	ABC transporter ATP-binding protein	-
R8611_RS09210 (PC0174_18080)	-	1806819..1808849 (-)	2031	WP_000825263.1	bacteriocin-associated integral membrane family protein	-
R8611_RS09215 (PC0174_18090)	-	1808926..1809222 (-)	297	WP_061816955.1	lactococcin 972 family bacteriocin	-
R8611_RS09220 (PC0174_18100)	comR	1809542..1810441 (-)	900	WP_000904867.1	helix-turn-helix domain-containing protein	Regulator
R8611_RS09225 (PC0174_18110)	rnmV	1810513..1811073 (-)	561	WP_000664448.1	ribonuclease M5	-
R8611_RS09230 (PC0174_18120)	-	1811073..1811846 (-)	774	WP_000575607.1	TatD family hydrolase	-
R8611_RS09235 (PC0174_18130)	-	1812152..1812871 (-)	720	Protein_1814	DUF1542 domain-containing protein	-
R8611_RS09240 (PC0174_18140)	rpmH	1813080..1813214 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
R8611_RS09245 (PC0174_18150)	-	1813359..1814573 (-)	1215	WP_050246153.1	pyridoxal phosphate-dependent aminotransferase	-
R8611_RS09250	-	1814729..1815021 (-)	293	Protein_1817	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35191.04 Da
• Isoelectric Point: 5.0703

>NTDB_id=82967 R8611_RS09220 WP_000904867.1 1809542..1810441(-) (comR) [Streptococcus pneumoniae strain PZ900700178]
MLIGQKIKEIRIEKGISRPDFCGDEQGLTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=82967 R8611_RS09220 WP_000904867.1 1809542..1810441(-) (comR) [Streptococcus pneumoniae strain PZ900700178]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGG
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• Helix-turn-helix (HTH_3) (7-59)

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368