Detailed information NTG0082881

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8611_RS00235
• Genome accession: NZ_AP026927
• Coordinates: 40403..41296 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343891.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700178
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 35403..46296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8611_RS00195 (PC0174_00350)	-	35716..36885 (+)	1170	WP_317647967.1	pyridoxal phosphate-dependent aminotransferase	-
R8611_RS00200 (PC0174_00360)	recO	36882..37652 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
R8611_RS00205 (PC0174_00370)	plsX	37649..38641 (+)	993	WP_000717458.1	phosphate acyltransferase PlsX	-
R8611_RS00210 (PC0174_00380)	-	38647..38880 (+)	234	WP_000136447.1	acyl carrier protein	-
R8611_RS00215 (PC0174_00390)	-	38917..39216 (+)	300	Protein_35	transposase family protein	-
R8611_RS00220 (PC0174_00400)	blpU	39419..39649 (+)	231	WP_001093075.1	bacteriocin-like peptide BlpU	-
R8611_RS00225	-	39652..39777 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
R8611_RS00230	-	40188..40382 (+)	195	WP_000756776.1	hypothetical protein	-
R8611_RS00235 (PC0174_00410)	comR	40403..41296 (+)	894	WP_000343891.1	XRE family transcriptional regulator	Regulator
R8611_RS00240 (PC0174_00420)	-	41840..42136 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
R8611_RS00245	-	42143..43279 (+)	1137	WP_000698828.1	hypothetical protein	-
R8611_RS00250 (PC0174_00430)	-	43276..43758 (+)	483	WP_001232094.1	stage II sporulation protein M	-
R8611_RS00255 (PC0174_00440)	-	43755..44351 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
R8611_RS00260 (PC0174_00450)	-	44332..44823 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34476.90 Da
• Isoelectric Point: 4.6063

>NTDB_id=82881 R8611_RS00235 WP_000343891.1 40403..41296(+) (comR) [Streptococcus pneumoniae strain PZ900700178]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKDSLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNVAEAESFYEKAISLAELLDDQVLVQKILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=82881 R8611_RS00235 WP_000343891.1 40403..41296(+) (comR) [Streptococcus pneumoniae strain PZ900700178]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGATAGCCTAGTTCAGATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGTTAAAGGCGAAATATGCTTTATTTGTAGATAAGAATGTGGCAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGATGATCAGGTATTAGTTCAGAAAATTTTAGCAGAAAAACAAATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37	100	0.374