Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SGQ73_RS13500 Genome accession   NZ_CP138878
Coordinates   2703259..2703924 (-) Length   221 a.a.
NCBI ID   WP_000697883.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 96     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2698259..2708924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGQ73_RS13480 (SGQ73_13480) - 2698724..2698837 (-) 114 WP_217654589.1 hypothetical protein -
  SGQ73_RS13485 (SGQ73_13485) - 2699501..2701501 (-) 2001 WP_000776746.1 ABC transporter permease -
  SGQ73_RS13490 (SGQ73_13490) - 2701498..2702253 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  SGQ73_RS13495 (SGQ73_13495) braS 2702361..2703248 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SGQ73_RS13500 (SGQ73_13500) braR 2703259..2703924 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SGQ73_RS13505 (SGQ73_13505) - 2703950..2704150 (-) 201 WP_000604723.1 hypothetical protein -
  SGQ73_RS13510 (SGQ73_13510) - 2704348..2705772 (+) 1425 WP_000953731.1 alkaline phosphatase -
  SGQ73_RS13515 - 2705832..2705933 (-) 102 WP_000731972.1 SE2200 family small protein -
  SGQ73_RS13520 (SGQ73_13520) - 2706055..2706510 (-) 456 WP_000106184.1 MarR family transcriptional regulator -
  SGQ73_RS13525 (SGQ73_13525) - 2706756..2707517 (-) 762 WP_000323451.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25433.52 Da        Isoelectric Point: 4.7961

>NTDB_id=828372 SGQ73_RS13500 WP_000697883.1 2703259..2703924(-) (braR) [Staphylococcus aureus strain 96]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=828372 SGQ73_RS13500 WP_000697883.1 2703259..2703924(-) (braR) [Staphylococcus aureus strain 96]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACGGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGACAATACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATTATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995