Detailed information NTG0828339

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QKW11_RS02030
• Genome accession: NZ_CP124851
• Coordinates: 432605..433753 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SF305
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 427605..438753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QKW11_RS02010 (QKW11_02010)	-	428013..428696 (-)	684	WP_015416808.1	ABC transporter ATP-binding protein	-
QKW11_RS02015 (QKW11_02015)	-	428711..430147 (-)	1437	WP_015416809.1	ABC transporter permease	-
QKW11_RS02020 (QKW11_02020)	-	430360..431043 (+)	684	WP_007410267.1	response regulator transcription factor	-
QKW11_RS02025 (QKW11_02025)	-	431030..432463 (+)	1434	WP_162303988.1	HAMP domain-containing sensor histidine kinase	-
QKW11_RS02030 (QKW11_02030)	rapC	432605..433753 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
QKW11_RS02035 (QKW11_02035)	phrC	433737..433856 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QKW11_RS02040 (QKW11_02040)	-	434005..434115 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
QKW11_RS02045 (QKW11_02045)	-	434195..435559 (-)	1365	WP_015416811.1	aspartate kinase	-
QKW11_RS02050 (QKW11_02050)	ceuB	435973..436926 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
QKW11_RS02055 (QKW11_02055)	-	436916..437863 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
QKW11_RS02060 (QKW11_02060)	-	437857..438615 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=828339 QKW11_RS02030 WP_007410270.1 432605..433753(+) (rapC) [Bacillus velezensis strain SF305]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=828339 QKW11_RS02030 WP_007410270.1 432605..433753(+) (rapC) [Bacillus velezensis strain SF305]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568