Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QKW11_RS01855 Genome accession   NZ_CP124851
Coordinates   388890..389054 (+) Length   54 a.a.
NCBI ID   WP_269434478.1    Uniprot ID   -
Organism   Bacillus velezensis strain SF305     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383890..394054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QKW11_RS01850 (QKW11_01850) srfAB 385781..388873 (+) 3093 Protein_324 surfactin non-ribosomal peptide synthetase SrfAB -
  QKW11_RS01855 (QKW11_01855) comS 388890..389054 (+) 165 WP_269434478.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6194.21 Da        Isoelectric Point: 12.0559

>NTDB_id=828338 QKW11_RS01855 WP_269434478.1 388890..389054(+) (comS) [Bacillus velezensis strain SF305]
MRARRNSSLNRSDKRLIRTIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=828338 QKW11_RS01855 WP_269434478.1 388890..389054(+) (comS) [Bacillus velezensis strain SF305]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAACCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

59.091

81.481

0.481