Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   QJS65_RS15950 Genome accession   NZ_CP124831
Coordinates   3038428..3038568 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain Sample7_7     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3033428..3043568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJS65_RS15925 (QJS65_15925) - 3033694..3034083 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  QJS65_RS15930 (QJS65_15930) comA 3034107..3034748 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QJS65_RS15935 (QJS65_15935) comP 3034829..3037141 (-) 2313 WP_045034542.1 ATP-binding protein Regulator
  QJS65_RS15940 (QJS65_15940) comX 3037195..3037365 (-) 171 WP_074041927.1 competence pheromone ComX -
  QJS65_RS15945 (QJS65_15945) - 3037362..3038276 (-) 915 WP_035701208.1 polyprenyl synthetase family protein -
  QJS65_RS15950 (QJS65_15950) degQ 3038428..3038568 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QJS65_RS15955 (QJS65_15955) - 3039074..3039427 (+) 354 WP_017367963.1 hypothetical protein -
  QJS65_RS15960 (QJS65_15960) - 3039464..3040690 (-) 1227 WP_035701209.1 HDOD domain-containing protein -
  QJS65_RS15965 (QJS65_15965) - 3040831..3042300 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  QJS65_RS15970 (QJS65_15970) - 3042318..3042869 (-) 552 WP_282745613.1 isochorismatase family cysteine hydrolase -
  QJS65_RS15975 (QJS65_15975) - 3042930..3043337 (-) 408 WP_007500468.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=828231 QJS65_RS15950 WP_003213123.1 3038428..3038568(-) (degQ) [Bacillus altitudinis strain Sample7_7]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=828231 QJS65_RS15950 WP_003213123.1 3038428..3038568(-) (degQ) [Bacillus altitudinis strain Sample7_7]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAACTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696