Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QJS65_RS15935 Genome accession   NZ_CP124831
Coordinates   3034829..3037141 (-) Length   770 a.a.
NCBI ID   WP_045034542.1    Uniprot ID   -
Organism   Bacillus altitudinis strain Sample7_7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3029829..3042141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJS65_RS15895 (QJS65_15895) - 3030235..3030666 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  QJS65_RS15900 (QJS65_15900) - 3030666..3031007 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  QJS65_RS15905 (QJS65_15905) - 3031000..3032478 (+) 1479 WP_058336867.1 Na+/H+ antiporter subunit D -
  QJS65_RS15910 (QJS65_15910) - 3032485..3032964 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  QJS65_RS15915 (QJS65_15915) - 3032964..3033245 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  QJS65_RS15920 (QJS65_15920) mnhG 3033229..3033603 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  QJS65_RS15925 (QJS65_15925) - 3033694..3034083 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  QJS65_RS15930 (QJS65_15930) comA 3034107..3034748 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QJS65_RS15935 (QJS65_15935) comP 3034829..3037141 (-) 2313 WP_045034542.1 ATP-binding protein Regulator
  QJS65_RS15940 (QJS65_15940) comX 3037195..3037365 (-) 171 WP_074041927.1 competence pheromone ComX -
  QJS65_RS15945 (QJS65_15945) - 3037362..3038276 (-) 915 WP_035701208.1 polyprenyl synthetase family protein -
  QJS65_RS15950 (QJS65_15950) degQ 3038428..3038568 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QJS65_RS15955 (QJS65_15955) - 3039074..3039427 (+) 354 WP_017367963.1 hypothetical protein -
  QJS65_RS15960 (QJS65_15960) - 3039464..3040690 (-) 1227 WP_035701209.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89578.19 Da        Isoelectric Point: 7.3068

>NTDB_id=828230 QJS65_RS15935 WP_045034542.1 3034829..3037141(-) (comP) [Bacillus altitudinis strain Sample7_7]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEVQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFIAITPTILVVVTFYILQKPEDLKYTLKLAFITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKANGEMIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=828230 QJS65_RS15935 WP_045034542.1 3034829..3037141(-) (comP) [Bacillus altitudinis strain Sample7_7]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGCGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATTAATGGAGAACCTGCTAACAATAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGGTCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCGGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGCGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTTTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTATTGCCATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCGCATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTTAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGTAT
AATTACCAAGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTAATGGAGAAATGATTGAAATTG
ATGAATCAACAAATGATAGTAAATTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGAGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACGCCGAAATTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAGAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTACAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCG
CTTTGATAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTCCTCCATTATGAGGACGAT
GGAGTTGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.645

100

0.49