Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   P8770_RS03640 Genome accession   NZ_CP124737
Coordinates   717652..718923 (-) Length   423 a.a.
NCBI ID   WP_023467494.1    Uniprot ID   A0A829LJ80
Organism   Limosilactobacillus fermentum strain EFEL6800     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 712652..723923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8770_RS03635 (P8770_03635) - 715897..717618 (-) 1722 WP_023467496.1 proline--tRNA ligase -
  P8770_RS03640 (P8770_03640) eeP 717652..718923 (-) 1272 WP_023467494.1 RIP metalloprotease RseP Regulator
  P8770_RS03645 (P8770_03645) - 718945..719733 (-) 789 WP_003681950.1 phosphatidate cytidylyltransferase -
  P8770_RS03650 (P8770_03650) - 719750..720517 (-) 768 WP_024271689.1 isoprenyl transferase -
  P8770_RS03655 (P8770_03655) frr 720650..721210 (-) 561 WP_003685219.1 ribosome recycling factor -
  P8770_RS03660 (P8770_03660) pyrH 721210..721935 (-) 726 WP_003685221.1 UMP kinase -
  P8770_RS03665 (P8770_03665) tsf 722016..722894 (-) 879 WP_003681955.1 translation elongation factor Ts -
  P8770_RS03670 (P8770_03670) rpsB 722985..723764 (-) 780 WP_003681957.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46087.46 Da        Isoelectric Point: 6.3990

>NTDB_id=827805 P8770_RS03640 WP_023467494.1 717652..718923(-) (eeP) [Limosilactobacillus fermentum strain EFEL6800]
MIITIITFIIVFGILVLVHEFGHYYFAKRAGILVREFSIGMGPKVWWRRSNGTTYTIRILPLGGYVRLAGADEDEDELRP
GTPVTLQTNEEGKVTLINASEKETLLEGIPLRIVDSDLEDKLIISGYENDDEETVKTYPVDHDATIVERDGTEVRIAPKD
VQFQSASLPARMMTNFAGPMNNFILSLLVFIILGFTLSGIPTNSNVLGGVTKNSVAAKAGLVSGDKITGVATTKVSTWND
ISQAISPNPGKKLAVTYQRDGKTYHTTVTPKATKQGSQTVGMIGIREEEKFDPVARINYGWRQFITAGTLIFAVLGHMIT
HGFSLNDLGGPVAIYAGTSQATSLGINGILAFLAMLSINLGIVNLIPIPALDGGKLLLNIVEGIIRRPIPEKVEGILNLA
GFALLMILMVLVTYNDIQRYFIH

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=827805 P8770_RS03640 WP_023467494.1 717652..718923(-) (eeP) [Limosilactobacillus fermentum strain EFEL6800]
TTGATCATCACCATCATTACTTTTATCATCGTCTTCGGAATCCTGGTGCTCGTTCACGAATTCGGCCACTACTACTTTGC
CAAGCGGGCCGGGATTTTAGTACGCGAGTTTTCGATTGGGATGGGGCCCAAGGTTTGGTGGCGGCGTTCAAACGGGACGA
CCTACACCATCCGGATCCTGCCGCTTGGGGGCTACGTCCGCCTGGCCGGGGCCGATGAAGATGAAGACGAACTCCGTCCC
GGGACGCCGGTGACCTTGCAAACCAATGAGGAAGGCAAGGTGACCCTGATCAACGCCAGCGAAAAGGAAACCCTGTTGGA
GGGGATTCCGCTGCGGATCGTTGACAGCGACCTGGAGGATAAGTTAATCATCTCCGGGTACGAAAATGATGATGAAGAAA
CCGTCAAGACCTACCCGGTTGATCACGACGCGACGATCGTCGAACGGGACGGGACCGAGGTGCGGATCGCCCCCAAGGAC
GTTCAGTTCCAATCGGCCAGCTTACCGGCGCGGATGATGACCAACTTTGCCGGGCCAATGAACAACTTCATCTTGTCCCT
GCTGGTCTTCATCATCCTGGGCTTTACCCTGAGCGGGATCCCCACCAACTCCAACGTTTTGGGCGGGGTGACCAAGAATT
CGGTGGCTGCCAAGGCCGGCCTGGTGAGCGGCGATAAAATTACCGGGGTGGCGACGACCAAGGTCAGCACCTGGAACGAT
ATTTCCCAGGCAATTTCCCCTAACCCGGGGAAGAAGCTCGCCGTTACCTACCAGCGCGATGGCAAGACCTACCACACCAC
CGTGACGCCTAAGGCCACCAAACAGGGGAGCCAAACGGTCGGGATGATCGGGATCAGAGAAGAGGAGAAGTTTGATCCGG
TCGCCCGCATTAACTACGGCTGGCGCCAATTTATCACCGCCGGCACCCTGATCTTTGCGGTGCTCGGCCACATGATTACG
CACGGCTTTAGCTTAAACGACCTGGGGGGGCCGGTGGCAATTTACGCTGGCACCTCGCAGGCCACCTCGTTAGGGATTAA
CGGCATCCTCGCCTTCTTGGCGATGCTGTCGATTAACCTAGGGATCGTTAACCTGATTCCGATCCCGGCCTTAGACGGGG
GGAAGCTCCTCTTAAACATTGTCGAAGGCATCATTCGCCGGCCAATTCCCGAAAAAGTGGAGGGGATTTTGAATTTGGCT
GGCTTTGCCCTCTTGATGATCCTGATGGTCCTTGTGACCTATAACGACATTCAACGCTACTTTATCCATTAA

Domains


Predicted by InterproScan.

(7-408)

(209-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A829LJ80

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.113

100

0.482

  eeP Streptococcus thermophilus LMD-9

48.113

100

0.482