Detailed information NTG0082743

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8507_RS10735
• Genome accession: NZ_AP026925
• Coordinates: 2074953..2076050 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266667.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700097
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2069953..2081050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8507_RS10710 (PC0094_20810)	pgsA	2070474..2071019 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8507_RS10715 (PC0094_20820)	rodZ	2071030..2071851 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8507_RS10720 (PC0094_20830)	yfmH	2071893..2073176 (-)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8507_RS10725 (PC0094_20840)	yfmF	2073173..2074423 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8507_RS10730 (PC0094_20850)	yaaA	2074582..2074950 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8507_RS10735 (PC0094_20860)	recF	2074953..2076050 (+)	1098	WP_000266667.1	DNA replication/repair protein RecF	Machinery gene
R8507_RS10740 (PC0094_20870)	guaB	2076101..2077579 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8507_RS10745 (PC0094_20880)	trpS	2077731..2078756 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8507_RS10750 (PC0094_20890)	-	2078968..2080590 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41944.01 Da
• Isoelectric Point: 8.6746

>NTDB_id=82743 R8507_RS10735 WP_000266667.1 2074953..2076050(+) (recF) [Streptococcus pneumoniae strain PZ900700097]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=82743 R8507_RS10735 WP_000266667.1 2074953..2076050(+) (recF) [Streptococcus pneumoniae strain PZ900700097]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAAGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCCTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46