Detailed information NTG0826756

Bioinformatically predicted

Overview

• Name: cqsS
• Type: Regulator
• Locus tag: QF117_RS04855
• Genome accession: NZ_CP124613
• Coordinates: 1082980..1085013 (-)
• Length: 677 a.a.
• NCBI ID: WP_282385040.1
• Uniprot ID: -
• Organism: Vibrio sp. YMD68
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1077980..1090013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QF117_RS04840 (QF117_04840)	-	1078857..1079837 (-)	981	WP_282385036.1	GTP-binding protein	-
QF117_RS04845 (QF117_04845)	-	1080412..1081365 (+)	954	WP_282385038.1	TDT family transporter	-
QF117_RS04850 (QF117_04850)	cqsA	1081728..1082912 (+)	1185	WP_282385039.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
QF117_RS04855 (QF117_04855)	cqsS	1082980..1085013 (-)	2034	WP_282385040.1	response regulator	Regulator
QF117_RS04860 (QF117_04860)	-	1085371..1088412 (-)	3042	WP_282385041.1	SMC family ATPase	-
QF117_RS04865 (QF117_04865)	-	1088415..1089557 (-)	1143	WP_282385042.1	exonuclease SbcCD subunit D	-

Sequence

Protein

• Length: 677 a.a.
• Molecular weight: 77284.09 Da
• Isoelectric Point: 5.0192

>NTDB_id=826756 QF117_RS04855 WP_282385040.1 1082980..1085013(-) (cqsS) [Vibrio sp. YMD68]
MTLVNKIYKYAEPNLNIVGWMGFVGFPFYYFIWSSVFPQPYENLPLRIVCSLALLTLALRDFVPRSLHRYLPHYYVWAIA
LCLPFFFSYMLMMNDWSMVWVMSFMASIFLHILLVHETRILVMQCVGSIGCAILASYFVGGQVEWHEIDWSYVPIFVFTY
MFGNIFYFRNQMEHESKIALAKSFGAGIAHEMRNPLSALKATIDLLKTMLVDNSVSAPTPSEKDQKIVSELLDDASEIIK
NGNEAIDLLLTSIDENRVSRSTFSIHTIEDVLSDAINSYPYKSLNAKDSVVVSKCENFEFLGSDTLLKYALYNLFKNAFY
YQGEETFRLDIRVESTHEFNVLSVRDNGVGIEKEKIGSIFNDFYTFGKNGSFGLGLPFCRRVMLSFGGDIVCHSEKGEWT
EFVLMFPKCDSDGVKDIKLDLIRNKSILSINVELPITKALNDGSFYRGYSFQTITLSTAIKREEYQFEYDLIFVDLDEID
ELALALLEDKLSFTEAKIVYLYQPDKHYHSNFNRFISCCAVSKKDMTLSLPQTLERLFFVPSCDDKNAIPKKTMVHTSTM
VLLVDDNDSLRSLTTLLLSQQGFQVVEAKDGSEVLKLVDSEDVDIIIMDIEMPHIDGYKATQILRTSGHIKSNIPIIGHT
GNNSQECIDQMKQAGMNDYVIKPATKDALLEKIEHYV

Nucleotide

• Length: 2034 bp

>NTDB_id=826756 QF117_RS04855 WP_282385040.1 1082980..1085013(-) (cqsS) [Vibrio sp. YMD68]
ATGACTCTTGTTAATAAGATATACAAGTATGCTGAGCCTAATCTCAATATTGTAGGCTGGATGGGTTTTGTAGGTTTCCC
GTTTTATTATTTCATTTGGTCTTCAGTGTTCCCTCAGCCCTATGAAAATCTACCTTTACGAATTGTTTGTTCGCTAGCGT
TATTGACCTTGGCGCTAAGAGACTTTGTTCCTCGTTCATTGCATAGATATTTACCGCATTATTATGTGTGGGCAATTGCT
CTGTGTTTACCGTTCTTTTTTTCATATATGTTGATGATGAACGACTGGTCCATGGTTTGGGTTATGTCTTTTATGGCATC
GATCTTTCTTCATATACTCCTGGTCCATGAAACACGCATTCTTGTCATGCAATGTGTTGGGTCTATTGGCTGTGCAATAC
TCGCGAGTTATTTTGTGGGTGGCCAAGTGGAATGGCATGAGATTGATTGGTCTTATGTACCGATTTTTGTCTTTACCTAT
ATGTTTGGAAACATCTTCTATTTTAGAAACCAGATGGAACATGAGTCTAAGATAGCGCTAGCCAAATCTTTCGGTGCAGG
TATCGCACATGAAATGAGAAATCCATTAAGTGCTTTAAAAGCGACGATAGATTTATTAAAAACCATGTTAGTTGACAATA
GTGTGTCGGCACCCACTCCATCTGAAAAAGATCAAAAGATAGTGAGTGAGTTATTAGATGATGCGAGTGAAATTATTAAA
AATGGCAACGAAGCCATCGACTTACTGTTGACGTCTATCGATGAAAATCGGGTTTCTCGTTCGACTTTTTCGATACACAC
CATTGAAGATGTTCTGTCTGATGCCATTAACAGCTATCCCTACAAATCCCTCAATGCAAAAGATTCTGTCGTGGTATCAA
AATGTGAAAACTTTGAATTCTTAGGCAGCGACACGCTTTTAAAGTATGCATTGTACAATCTATTCAAAAATGCGTTTTAC
TATCAGGGTGAAGAAACGTTTCGATTGGACATTCGTGTCGAATCTACGCACGAATTTAATGTACTTTCTGTTCGAGATAA
TGGGGTTGGCATTGAAAAAGAAAAGATAGGTTCGATATTCAATGATTTCTACACGTTTGGAAAAAATGGCAGCTTTGGAC
TCGGGTTGCCCTTTTGCCGACGTGTGATGCTCTCGTTTGGTGGGGATATTGTGTGCCATTCCGAAAAAGGGGAGTGGACT
GAATTTGTCTTAATGTTTCCGAAATGCGATTCAGATGGGGTTAAAGATATTAAACTCGATCTTATCCGAAATAAATCCAT
TCTATCGATTAATGTTGAGCTGCCTATAACAAAAGCGTTAAACGACGGTTCTTTTTATCGCGGCTATTCTTTCCAAACCA
TTACTCTGAGTACTGCTATTAAAAGAGAAGAATACCAATTTGAGTATGATTTAATATTCGTCGACCTCGATGAAATAGAC
GAACTGGCTCTCGCTTTACTAGAGGATAAACTCTCCTTTACTGAGGCCAAAATCGTTTACTTATATCAACCGGATAAACA
CTACCATTCAAATTTTAATCGCTTTATATCTTGTTGTGCCGTGAGCAAAAAAGACATGACATTATCGTTACCCCAAACGC
TAGAACGTTTGTTTTTTGTCCCCAGTTGCGATGATAAGAATGCGATACCCAAAAAAACGATGGTGCACACAAGCACAATG
GTGTTGCTGGTCGATGATAATGATTCTCTGCGTTCTTTGACCACTCTGCTACTTTCTCAGCAGGGCTTTCAAGTAGTAGA
AGCGAAAGATGGCAGTGAAGTGCTTAAGCTTGTCGATAGCGAGGATGTTGATATCATCATTATGGATATTGAGATGCCTC
ATATTGATGGCTACAAGGCAACTCAGATATTAAGAACATCGGGCCATATAAAATCAAATATCCCTATTATCGGGCATACA
GGAAATAATAGCCAAGAATGCATTGACCAGATGAAACAGGCTGGCATGAATGACTATGTGATTAAGCCAGCAACTAAAGA
TGCGTTATTAGAAAAAATAGAACACTATGTTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (184-236)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (305-407)

• Response regulator receiver domain (Response_reg) (561-674)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsS	Vibrio cholerae strain A1552	48.763	100	0.495