Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SHN03_RS06165 Genome accession   NZ_CP138566
Coordinates   1276063..1277349 (+) Length   428 a.a.
NCBI ID   WP_000121123.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AUSMDU00020487     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1271063..1282349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SHN03_RS06135 - 1271459..1271572 (+) 114 WP_001789890.1 hypothetical protein -
  SHN03_RS06140 tsf 1271607..1272488 (+) 882 WP_000201387.1 translation elongation factor Ts -
  SHN03_RS06145 pyrH 1272625..1273347 (+) 723 WP_000057330.1 UMP kinase -
  SHN03_RS06150 frr 1273366..1273920 (+) 555 WP_001280003.1 ribosome recycling factor -
  SHN03_RS06155 - 1274292..1275062 (+) 771 WP_000473705.1 isoprenyl transferase -
  SHN03_RS06160 - 1275069..1275851 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  SHN03_RS06165 eeP 1276063..1277349 (+) 1287 WP_000121123.1 RIP metalloprotease RseP Regulator
  SHN03_RS06170 - 1277369..1279072 (+) 1704 WP_000814089.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48134.53 Da        Isoelectric Point: 9.6293

>NTDB_id=826628 SHN03_RS06165 WP_000121123.1 1276063..1277349(+) (eeP) [Staphylococcus aureus strain AUSMDU00020487]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERNGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=826628 SHN03_RS06165 WP_000121123.1 1276063..1277349(+) (eeP) [Staphylococcus aureus strain AUSMDU00020487]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACCGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCGAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGACGACTTATTCATAGAAGGTATTACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAGTTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCTTATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTAATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTTAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(191-265)

Peptidase family M50 (Peptidase_M50)

(9-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

40.046

100

0.404
  eeP Streptococcus thermophilus LMD-9

39.815

100

0.402