Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   QI003_RS01950 Genome accession   NZ_CP124601
Coordinates   369010..369408 (-) Length   132 a.a.
NCBI ID   WP_014662735.1    Uniprot ID   -
Organism   Bacillus stercoris strain BS21     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 364010..374408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS01920 (QI003_01920) - 364590..365270 (-) 681 WP_134976095.1 amino acid ABC transporter permease -
  QI003_RS01925 (QI003_01925) - 365280..366143 (-) 864 WP_014662728.1 transporter substrate-binding domain-containing protein -
  QI003_RS01930 (QI003_01930) - 366305..366500 (+) 196 Protein_336 hypothetical protein -
  QI003_RS01935 (QI003_01935) - 366518..366973 (+) 456 WP_040084209.1 RDD family protein -
  QI003_RS01940 (QI003_01940) - 367054..367386 (+) 333 WP_040084394.1 YckD family protein -
  QI003_RS01945 (QI003_01945) bglC 367540..368973 (+) 1434 WP_069148927.1 6-phospho-beta-glucosidase -
  QI003_RS01950 (QI003_01950) nin/comJ 369010..369408 (-) 399 WP_014662735.1 DNA-entry nuclease inhibitor Regulator
  QI003_RS01955 (QI003_01955) nucA/comI 369435..369884 (-) 450 WP_134976099.1 DNA-entry nuclease Machinery gene
  QI003_RS01960 (QI003_01960) tlpC 370052..371773 (-) 1722 WP_282373953.1 methyl-accepting chemotaxis protein TlpC -
  QI003_RS01965 (QI003_01965) hxlB 371884..372441 (-) 558 WP_014662738.1 6-phospho-3-hexuloisomerase -
  QI003_RS01970 (QI003_01970) hxlA 372447..373079 (-) 633 WP_095431239.1 3-hexulose-6-phosphate synthase -
  QI003_RS01975 (QI003_01975) - 373312..373674 (+) 363 WP_134976103.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14967.95 Da        Isoelectric Point: 4.7105

>NTDB_id=826583 QI003_RS01950 WP_014662735.1 369010..369408(-) (nin/comJ) [Bacillus stercoris strain BS21]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HLTENGIQIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=826583 QI003_RS01950 WP_014662735.1 369010..369408(-) (nin/comJ) [Bacillus stercoris strain BS21]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGTTATACTGCGGCAGACGGGGCCATTTCCTTTGAGGCGCAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAGAAAAAAGTGACTGTTCCTTTT
CATCTCACAGAAAACGGAATTCAAATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTCCCCAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCTGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962