Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | QI003_RS00575 | Genome accession | NZ_CP124601 |
| Coordinates | 103432..105864 (+) | Length | 810 a.a. |
| NCBI ID | WP_282373901.1 | Uniprot ID | - |
| Organism | Bacillus stercoris strain BS21 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98432..110864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QI003_RS00560 (QI003_00560) | ctsR | 101309..101773 (+) | 465 | WP_014662512.1 | transcriptional regulator CtsR | - |
| QI003_RS00565 (QI003_00565) | mcsA | 101787..102344 (+) | 558 | WP_041521234.1 | protein-arginine kinase activator protein McsA | - |
| QI003_RS00570 (QI003_00570) | - | 102344..103435 (+) | 1092 | WP_069148826.1 | protein arginine kinase | - |
| QI003_RS00575 (QI003_00575) | clpC | 103432..105864 (+) | 2433 | WP_282373901.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| QI003_RS00580 (QI003_00580) | radA | 105956..107332 (+) | 1377 | WP_015252992.1 | DNA repair protein RadA | Machinery gene |
| QI003_RS00585 (QI003_00585) | disA | 107336..108418 (+) | 1083 | WP_014662516.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| QI003_RS00590 (QI003_00590) | - | 108534..109634 (+) | 1101 | WP_282373902.1 | PIN/TRAM domain-containing protein | - |
| QI003_RS00595 (QI003_00595) | ispD | 109649..110347 (+) | 699 | WP_134976549.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| QI003_RS00600 (QI003_00600) | ispF | 110340..110816 (+) | 477 | WP_014475594.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90102.65 Da Isoelectric Point: 6.3037
>NTDB_id=826580 QI003_RS00575 WP_282373901.1 103432..105864(+) (clpC) [Bacillus stercoris strain BS21]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTNAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGK
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTNAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGK
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=826580 QI003_RS00575 WP_282373901.1 103432..105864(+) (clpC) [Bacillus stercoris strain BS21]
ATGATGTTTGGAAGATTTACAGAACGGGCTCAAAAAGTACTGGCGCTAGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAATATTGGCACTGAGCATATTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCCAAAGCTCTTCAAGCGCTTG
GACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTTGATCGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTAT
ACTCCTAGAGCTAAAAAAGTCATTGAACTTTCGATGGATGAAGCAAGAAAACTCGGTCATTCTTATGTCGGAACAGAACA
TATTCTTCTTGGCCTGATTCGTGAAGGAGAAGGTGTTGCCGCGAGAGTTTTGAATAATCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGATAGCTTGGCAAGAGACTTGACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGCAA
GGAAATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTTGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATCTTACGTGATAAACGTGTGATG
ACATTAGACATGGGAACGGTTGTTGCCGGCACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAAAAGGTCATGGATGA
AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACATTAATCGGGGCAGGCGGAGCAGAAGGTGCAA
TCGATGCATCTAATATCTTAAAACCTTCACTTGCTCGCGGTGAGCTCCAATGTATTGGAGCAACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGACGCAGCACTGGAACGCCGTTTTCAGCCGATCCAAGTTGATCAGCCATCTGTCGATGAAAG
TATTCAAATTTTACAAGGTCTTCGTGACAGATACGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCCATTGACTTAATCGATGAAGCTGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCAGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTCAATATGGAAAACATTCTTCA
CTCTCGTGTCATCGGCCAGGATGAAGCGGTTGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGGTTAAAAGATC
CTAAACGCCCAATTGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTTGGCGATGAAGAATCCATGATCAGAATAGACATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTGGGATACGATGAAGGCGGTCAATTGACTGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGTCGATTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTTTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACTCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGGGCGTTTAGACCTGAGTTCATCAACCGCATCGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATCGTGTCATTAATGTCTGATCAATTGACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACTAATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGATCTGGAGTACGGAGCCCGTCCGTTAAGAAGAGCGATCCAAAAACACGTAG
AGGATCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCAAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGGGCTCAAAAAGTACTGGCGCTAGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAATATTGGCACTGAGCATATTTTATTAGGACTGGTAAGAGAAGGAGAGGGCATTGCTGCCAAAGCTCTTCAAGCGCTTG
GACTCGGTTCAGATAAAATTCAGAAAGAAGTAGAAAGTTTGATCGGGCGCGGGCAGGAAATGTCTCAAACGATTCATTAT
ACTCCTAGAGCTAAAAAAGTCATTGAACTTTCGATGGATGAAGCAAGAAAACTCGGTCATTCTTATGTCGGAACAGAACA
TATTCTTCTTGGCCTGATTCGTGAAGGAGAAGGTGTTGCCGCGAGAGTTTTGAATAATCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAGGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGATAGCTTGGCAAGAGACTTGACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGCAA
GGAAATCCAGCGTGTCATTGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTTGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAATGAAGTACCCGAAATCTTACGTGATAAACGTGTGATG
ACATTAGACATGGGAACGGTTGTTGCCGGCACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAAAAGGTCATGGATGA
AATTCGCCAGGCAGGAAATATCATTCTATTCATCGATGAGCTCCATACATTAATCGGGGCAGGCGGAGCAGAAGGTGCAA
TCGATGCATCTAATATCTTAAAACCTTCACTTGCTCGCGGTGAGCTCCAATGTATTGGAGCAACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGACGCAGCACTGGAACGCCGTTTTCAGCCGATCCAAGTTGATCAGCCATCTGTCGATGAAAG
TATTCAAATTTTACAAGGTCTTCGTGACAGATACGAAGCCCACCACCGTGTTTCTATCACTGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCCATTGACTTAATCGATGAAGCTGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCAGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGTGTGCCTGTATCTAAAATCGCCCAAACTGAAACTGATAAGCTTCTCAATATGGAAAACATTCTTCA
CTCTCGTGTCATCGGCCAGGATGAAGCGGTTGTAGCTGTTGCAAAAGCCGTCAGACGTGCGAGAGCAGGGTTAAAAGATC
CTAAACGCCCAATTGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTTGGCGATGAAGAATCCATGATCAGAATAGACATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTGGGATACGATGAAGGCGGTCAATTGACTGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGTCGATTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTTTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACTCAAAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGGGCGTTTAGACCTGAGTTCATCAACCGCATCGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACATCTTACT
GAAATCGTGTCATTAATGTCTGATCAATTGACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACTAATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGATCTGGAGTACGGAGCCCGTCCGTTAAGAAGAGCGATCCAAAAACACGTAG
AGGATCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGATGGCAAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.63 |
100 |
0.996 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.062 |
100 |
0.501 |
| clpC | Streptococcus thermophilus LMD-9 |
46.481 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.238 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.253 |
100 |
0.443 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.805 |
87.778 |
0.428 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.234 |
80.123 |
0.419 |