Detailed information NTG0826425

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: SE698_RS00095
• Genome accession: NZ_CP138428
• Coordinates: 18457..19866 (-)
• Length: 469 a.a.
• NCBI ID: WP_001188777.1
• Uniprot ID: Q32A39
• Organism: Escherichia coli strain 6EVA
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 13457..24866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE698_RS00070	yihA	14750..15382 (-)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
SE698_RS00075	-	15679..15845 (+)	167	Protein_9	hypothetical protein	-
SE698_RS00080	yihI	15964..16473 (+)	510	WP_001295266.1	Der GTPase-activating protein YihI	-
SE698_RS00085	hemN	16662..18035 (+)	1374	WP_319054356.1	oxygen-independent coproporphyrinogen III oxidase	-
SE698_RS00090	yshB	18235..18345 (-)	111	WP_000893994.1	YshB family small membrane protein	-
SE698_RS00095	luxO	18457..19866 (-)	1410	WP_001188777.1	nitrogen regulation protein NR(I)	Regulator
SE698_RS00100	glnL	19878..20927 (-)	1050	WP_147702234.1	nitrogen regulation protein NR(II)	-
SE698_RS00105	glnA	21101..22510 (-)	1410	WP_001271717.1	glutamate--ammonia ligase	-
SE698_RS00110	typA	22883..24706 (+)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52254.74 Da
• Isoelectric Point: 6.4561

>NTDB_id=826425 SE698_RS00095 WP_001188777.1 18457..19866(-) (luxO) [Escherichia coli strain 6EVA]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=826425 SE698_RS00095 WP_001188777.1 18457..19866(-) (luxO) [Escherichia coli strain 6EVA]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
GTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTTGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCACTGCTCAAGCAGATTAAACAGCGCCATCCGATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTGGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
AGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGTCACGAGA
AAGGCGCGTTTACCGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCTGATGGCGGTACATTATTTCTCGATGAA
ATTGGCGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGGGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCCGC
GCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCTGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACACACCCAAGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: Q32A39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392